Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:134346320-134477412

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32 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc30a2 4 134343181 to 134354484 11303 + protein coding gene solute carrier family 30 (zinc transporter), member 2
Extl1 4 134356373 to 134372547 16174 - protein coding gene exostosin-like glycosyltransferase 1
Cpgi15036 4 134357069 to 134357782 713 CpG island CpG island 15036
D4Mit339.2 4 134367263 to 134367439 176 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 339.2
D4Mit339 4 134367426 to 134367547 121 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 339
Cpgi15037 4 134370980 to 134371535 555 CpG island CpG island 15037
Tssr43895 4 134371614 to 134371634 20 - TSS region transcription start site region 43895
Tssr43896 4 134372529 to 134372561 32 - TSS region transcription start site region 43896
Tssr43897 4 134372575 to 134372589 14 - TSS region transcription start site region 43897
Gm5589 4 134385124 to 134386978 1854 + unclassified gene predicted gene 5589
Cpgi15038 4 134395995 to 134396384 389 CpG island CpG island 15038
Pafah2 4 134396320 to 134427412 31092 + protein coding gene platelet-activating factor acetylhydrolase 2
Tssr39557 4 134396359 to 134396409 50 + TSS region transcription start site region 39557
Tssr39558 4 134397306 to 134397326 20 + TSS region transcription start site region 39558
Tssr39559 4 134397380 to 134397400 20 + TSS region transcription start site region 39559
Cpgi15039 4 134401114 to 134401507 393 CpG island CpG island 15039
Tssr39560 4 134401303 to 134401325 22 + TSS region transcription start site region 39560
Tssr39561 4 134401609 to 134401630 21 + TSS region transcription start site region 39561
Tssr39562 4 134401659 to 134401674 15 + TSS region transcription start site region 39562
Tssr43898 4 134402059 to 134402070 11 - TSS region transcription start site region 43898
Tssr39563 4 134402175 to 134402190 15 + TSS region transcription start site region 39563
Gm30453 4 134433718 to 134448279 14561 - lncRNA gene predicted gene, 30453
Cpgi15040 4 134437000 to 134437170 170 CpG island CpG island 15040
1700021N21Rik 4 134448766 to 134450171 1405 - lncRNA gene RIKEN cDNA 1700021N21 gene
Cpgi15041 4 134453838 to 134454023 185 CpG island CpG island 15041
Cpgi15042 4 134467662 to 134469367 1705 CpG island CpG island 15042
Stmn1 4 134468320 to 134473843 5523 + protein coding gene stathmin 1
Tssr39564 4 134468334 to 134468406 72 + TSS region transcription start site region 39564
Gm23634 4 134468364 to 134468454 90 + miRNA gene predicted gene, 23634
Tssr1332 4 134470098 to 134470111 13 + TSS region transcription start site region 1332
Tssr39565 4 134470746 to 134470772 26 + TSS region transcription start site region 39565
Tssr1333 4 134472808 to 134472821 13 + TSS region transcription start site region 1333