Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:134128041-134338399

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh3bgrl3 4 134127406 to 134128753 1347 - protein coding gene SH3 domain binding glutamic acid-rich protein-like 3
Tssr43872 4 134128029 to 134128050 21 - TSS region transcription start site region 43872
Tssr43873 4 134128052 to 134128076 24 - TSS region transcription start site region 43873
Tssr43874 4 134128082 to 134128091 9 - TSS region transcription start site region 43874
Cpgi15028 4 134128252 to 134129120 868 CpG island CpG island 15028
Tssr43875 4 134128680 to 134128700 20 - TSS region transcription start site region 43875
Tssr43876 4 134128707 to 134128770 63 - TSS region transcription start site region 43876
Tssr43877 4 134129604 to 134129611 7 - TSS region transcription start site region 43877
Cep85 4 134129858 to 134187085 57227 - protein coding gene centrosomal protein 85
Tssr43878 4 134154387 to 134154415 28 - TSS region transcription start site region 43878
Tssr43879 4 134154459 to 134154482 23 - TSS region transcription start site region 43879
Tssr43880 4 134156903 to 134156917 14 - TSS region transcription start site region 43880
Tssr43881 4 134156922 to 134156932 10 - TSS region transcription start site region 43881
Gm46894 4 134159957 to 134164109 4152 + protein coding gene predicted gene, 46894
Tssr39538 4 134160350 to 134160376 26 + TSS region transcription start site region 39538
Gm27619 4 134167808 to 134167895 87 - snoRNA gene predicted gene, 27619
Cpgi15029 4 134186301 to 134187496 1195 CpG island CpG island 15029
Tssr43882 4 134186992 to 134187006 14 - TSS region transcription start site region 43882
Tssr43883 4 134187019 to 134187090 71 - TSS region transcription start site region 43883
Gm7534 4 134190804 to 134203004 12200 - protein coding gene predicted gene 7534
Gm13131 4 134199830 to 134200150 320 - pseudogene predicted gene 13131
Catsper4 4 134211970 to 134227383 15413 - protein coding gene cation channel, sperm associated 4
Tssr43884 4 134227359 to 134227388 29 - TSS region transcription start site region 43884
Tssr43885 4 134227390 to 134227406 16 - TSS region transcription start site region 43885
Cnksr1 4 134228041 to 134238399 10358 - protein coding gene connector enhancer of kinase suppressor of Ras 1
Cpgi15030 4 134238100 to 134238564 464 CpG island CpG island 15030
Tssr43886 4 134238326 to 134238369 43 - TSS region transcription start site region 43886
Tssr43887 4 134238372 to 134238398 26 - TSS region transcription start site region 43887
Zfp593 4 134243306 to 134245591 2285 - protein coding gene zinc finger protein 593
Tssr39539 4 134243754 to 134243768 14 + TSS region transcription start site region 39539
E130218I03Rik 4 134243763 to 134245873 2110 + lncRNA gene RIKEN cDNA E130218I03 gene
Tssr39540 4 134244109 to 134244146 37 + TSS region transcription start site region 39540
Tssr39541 4 134244192 to 134244204 12 + TSS region transcription start site region 39541
Cpgi15031 4 134244961 to 134245841 880 CpG island CpG island 15031
Tssr43888 4 134245461 to 134245470 9 - TSS region transcription start site region 43888
Tssr43889 4 134245503 to 134245510 7 - TSS region transcription start site region 43889
Tssr43890 4 134245517 to 134245533 16 - TSS region transcription start site region 43890
Tssr43891 4 134245538 to 134245577 39 - TSS region transcription start site region 43891
Tssr43892 4 134245579 to 134245604 25 - TSS region transcription start site region 43892
Tssr39542 4 134246933 to 134246934 1 + TSS region transcription start site region 39542
Gm30191 4 134246935 to 134250042 3107 + protein coding gene predicted gene, 30191
Tssr39543 4 134246942 to 134246969 27 + TSS region transcription start site region 39543
Cpgi15032 4 134249524 to 134250128 604 CpG island CpG island 15032
Cpgi15033 4 134250687 to 134252404 1717 CpG island CpG island 15033
Grrp1 4 134251110 to 134254106 2996 - protein coding gene glycine/arginine rich protein 1
Tssr43893 4 134254076 to 134254128 52 - TSS region transcription start site region 43893
Gm42325 4 134255786 to 134265655 9869 + lncRNA gene predicted gene, 42325
Tssr39544 4 134268334 to 134268345 11 + TSS region transcription start site region 39544
Pdik1l 4 134275002 to 134287846 12844 - protein coding gene PDLIM1 interacting kinase 1 like
Cpgi15034 4 134286444 to 134288095 1651 CpG island CpG island 15034
Tssr43894 4 134287215 to 134287258 43 - TSS region transcription start site region 43894
D4Jcs21 4 134312212 to 134312548 336 DNA segment DNA segment, Chr 4, John C. Schimenti 21
Tssr39545 4 134315094 to 134315103 9 + TSS region transcription start site region 39545
Tssr39546 4 134315112 to 134315126 14 + TSS region transcription start site region 39546
Trim63 4 134315120 to 134329629 14509 + protein coding gene tripartite motif-containing 63
Tssr39547 4 134324897 to 134324910 13 + TSS region transcription start site region 39547
Gm13195 4 134335498 to 134335758 260 - pseudogene predicted gene 13195