Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:133855663-133965674

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rps6ka1 4 133847290 to 133887797 40507 - protein coding gene ribosomal protein S6 kinase polypeptide 1
Tssr43821 4 133865316 to 133865337 21 - TSS region transcription start site region 43821
Gm12977 4 133871830 to 133876533 4703 + antisense lncRNA gene predicted gene 12977
Tssr43822 4 133872304 to 133872346 42 - TSS region transcription start site region 43822
Tssr43823 4 133872997 to 133873044 47 - TSS region transcription start site region 43823
Tssr43824 4 133873048 to 133873061 13 - TSS region transcription start site region 43824
Tssr43825 4 133874658 to 133874669 11 - TSS region transcription start site region 43825
Tssr43826 4 133874682 to 133874722 40 - TSS region transcription start site region 43826
Tssr43827 4 133875228 to 133875239 11 - TSS region transcription start site region 43827
Tssr43828 4 133875260 to 133875274 14 - TSS region transcription start site region 43828
Gm12985 4 133882945 to 133883127 182 - pseudogene predicted gene 12985
Gm22523 4 133883399 to 133883498 99 - snRNA gene predicted gene, 22523
Cpgi15018 4 133887040 to 133888452 1412 CpG island CpG island 15018
Tssr43829 4 133887744 to 133887762 18 - TSS region transcription start site region 43829
Tssr43830 4 133887765 to 133887804 39 - TSS region transcription start site region 43830
Tssr43831 4 133887823 to 133887824 1 - TSS region transcription start site region 43831
Tssr43832 4 133899469 to 133899493 24 - TSS region transcription start site region 43832
Cpgi15019 4 133910454 to 133911296 842 CpG island CpG island 15019
4930429E23Rik 4 133910553 to 133911443 890 unclassified gene RIKEN cDNA 4930429E23 gene
Tssr43833 4 133910663 to 133910674 11 - TSS region transcription start site region 43833
Tssr43834 4 133910690 to 133910712 22 - TSS region transcription start site region 43834
Tssr43835 4 133910730 to 133910735 5 - TSS region transcription start site region 43835
Tssr39508 4 133944019 to 133944027 8 + TSS region transcription start site region 39508
Hmgn2 4 133964739 to 133967991 3252 - protein coding gene high mobility group nucleosomal binding domain 2