Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:133529142-133620320

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdf1 4 133518963 to 133530790 11827 + protein coding gene keratinocyte differentiation factor 1
Nudc 4 133532542 to 133545996 13454 - protein coding gene nudC nuclear distribution protein
Tssr43766 4 133536769 to 133536784 15 - TSS region transcription start site region 43766
Cpgi15007 4 133545401 to 133546268 867 CpG island CpG island 15007
Tssr43767 4 133545618 to 133545628 10 - TSS region transcription start site region 43767
Tssr43768 4 133545906 to 133546011 105 - TSS region transcription start site region 43768
Tssr39489 4 133553370 to 133553393 23 + TSS region transcription start site region 39489
Nr0b2 4 133553376 to 133556536 3160 + protein coding gene nuclear receptor subfamily 0, group B, member 2
Gm23158 4 133558824 to 133558949 125 - miRNA gene predicted gene, 23158
Cpgi15008 4 133574142 to 133575320 1178 CpG island CpG island 15008
Tssr39490 4 133574728 to 133574771 43 + TSS region transcription start site region 39490
Gpatch3 4 133574745 to 133584242 9497 + protein coding gene G patch domain containing 3
Cpgi15009 4 133584018 to 133584953 935 CpG island CpG island 15009
Tssr39491 4 133584337 to 133584348 11 + TSS region transcription start site region 39491
Tssr39492 4 133584355 to 133584415 60 + TSS region transcription start site region 39492
Gpn2 4 133584373 to 133591735 7362 + protein coding gene GPN-loop GTPase 2
Tssr39493 4 133584419 to 133584426 7 + TSS region transcription start site region 39493
Gm42324 4 133594939 to 133596007 1068 - lncRNA gene predicted gene, 42324
Tssr43769 4 133598765 to 133598788 23 - TSS region transcription start site region 43769
Tssr43770 4 133598797 to 133598830 33 - TSS region transcription start site region 43770
Cpgi15010 4 133599286 to 133600394 1108 CpG island CpG island 15010
Sfn 4 133600556 to 133602168 1612 - protein coding gene stratifin
Cpgi15011 4 133601454 to 133601924 470 CpG island CpG island 15011
Tssr43771 4 133601477 to 133601515 38 - TSS region transcription start site region 43771
Tssr43772 4 133601822 to 133601838 16 - TSS region transcription start site region 43772
Tssr43773 4 133601839 to 133601868 29 - TSS region transcription start site region 43773
Tssr43774 4 133601871 to 133601889 18 - TSS region transcription start site region 43774
Tssr43775 4 133601892 to 133601904 12 - TSS region transcription start site region 43775
Zdhhc18 4 133604656 to 133633480 28824 - protein coding gene zinc finger, DHHC domain containing 18