Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:133362146-133472153

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssen1 4 109800935 to 133427471 23626536 QTL suseptibility to Sendai virus 1
Cpgi14999 4 133369629 to 133370122 493 CpG island CpG island 14999
Tssr39475 4 133369702 to 133369709 7 + TSS region transcription start site region 39475
Slc9a1 4 133369711 to 133423702 53991 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 1
Tssr39476 4 133369720 to 133369743 23 + TSS region transcription start site region 39476
Tssr39477 4 133369765 to 133369780 15 + TSS region transcription start site region 39477
Mir5122 4 133369776 to 133369864 88 + miRNA gene microRNA 5122
Tssr39478 4 133370189 to 133370229 40 + TSS region transcription start site region 39478
Tssr1327 4 133378757 to 133378761 4 + TSS region transcription start site region 1327
Tssr39479 4 133403942 to 133403945 3 + TSS region transcription start site region 39479
Tssr39480 4 133412016 to 133412031 15 + TSS region transcription start site region 39480
Tssr39481 4 133412165 to 133412177 12 + TSS region transcription start site region 39481
Tssr39482 4 133415422 to 133415440 18 + TSS region transcription start site region 39482
Tssr43758 4 133417146 to 133417153 7 - TSS region transcription start site region 43758
Tssr43759 4 133417164 to 133417173 9 - TSS region transcription start site region 43759
Tssr39483 4 133417203 to 133417229 26 + TSS region transcription start site region 39483
D4Dcr27 4 133427364 to 133427461 97 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 27
ctl 4 133427367 to 137890684 4463317 heritable phenotypic marker curly tail-like
Psds2 4 133427367 to 137890684 4463317 QTL psoriasis-like skin disease severity 2
Bcmd2 4 133427367 to 150704994 17277627 QTL B cell maturation defect 2
D4Mit204 4 133427367 to 133427471 104 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 204
Femwf13 4 133427367 to 133427471 104 QTL femur work to failure 13
1700091J24Rik 4 133432739 to 133434897 2158 - lncRNA gene RIKEN cDNA 1700091J24 gene
Tssr43760 4 133432924 to 133432932 8 - TSS region transcription start site region 43760
Tssr43761 4 133432980 to 133433016 36 - TSS region transcription start site region 43761
Gm42322 4 133437060 to 133440366 3306 - lncRNA gene predicted gene, 42322
Tssr39484 4 133443316 to 133443335 19 + TSS region transcription start site region 39484
Cpgi15000 4 133468070 to 133468441 371 CpG island CpG island 15000