Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:133062188-133172203

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ahdc1 4 133011265 to 133078110 66845 + protein coding gene AT hook, DNA binding motif, containing 1
Tssr39446 4 133068269 to 133068273 4 + TSS region transcription start site region 39446
Tssr43734 4 133070877 to 133070882 5 - TSS region transcription start site region 43734
Tssr43735 4 133070894 to 133070905 11 - TSS region transcription start site region 43735
Tssr39447 4 133077518 to 133077533 15 + TSS region transcription start site region 39447
Cpgi14986 4 133084981 to 133085885 904 CpG island CpG island 14986
Gm26615 4 133085474 to 133089146 3672 + lincRNA gene predicted gene, 26615
Cpgi14987 4 133092501 to 133092859 358 CpG island CpG island 14987
Tssr39448 4 133092529 to 133092540 11 + TSS region transcription start site region 39448
Tssr43736 4 133095325 to 133095353 28 - TSS region transcription start site region 43736
Tssr39449 4 133096856 to 133096863 7 + TSS region transcription start site region 39449
Tssr43737 4 133103862 to 133103873 11 - TSS region transcription start site region 43737
Tssr39450 4 133104526 to 133104536 10 + TSS region transcription start site region 39450
n-TGgcc1 4 133114496 to 133114566 70 - tRNA gene nuclear encoded tRNA glycine 1 (anticodon GCC)
Tssr39451 4 133117188 to 133117203 15 + TSS region transcription start site region 39451
Cpgi14988 4 133129621 to 133129827 206 CpG island CpG island 14988
Cpgi14989 4 133130383 to 133131202 819 CpG island CpG island 14989
Wasf2 4 133130531 to 133199723 69192 + protein coding gene WAS protein family, member 2
Tssr39452 4 133130534 to 133130590 56 + TSS region transcription start site region 39452
Tssr39453 4 133130613 to 133130636 23 + TSS region transcription start site region 39453
Tssr39454 4 133130642 to 133130656 14 + TSS region transcription start site region 39454
Tssr39455 4 133132860 to 133132867 7 + TSS region transcription start site region 39455
D4Mit1007 4 133151662 to 133151799 137 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 1007
D4Mit1000 4 133151816 to 133151944 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 1000
Tssr43738 4 133159247 to 133159254 7 - TSS region transcription start site region 43738
Tssr43739 4 133159261 to 133159273 12 - TSS region transcription start site region 43739
Tssr43740 4 133159291 to 133159300 9 - TSS region transcription start site region 43740
Tssr43741 4 133169638 to 133169643 5 - TSS region transcription start site region 43741
Gm24636 4 133171427 to 133171714 287 - unclassified non-coding RNA gene predicted gene, 24636