Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Ssen1 | 4 | 23626536 | QTL | suseptibility to Sendai virus 1 | ||
Ptpru | 4 | 69831 | - | protein coding gene | protein tyrosine phosphatase, receptor type, U | |
Cpgi14940 | 4 | 365 | CpG island | CpG island 14940 | ||
Cpgi14941 | 4 | 318 | CpG island | CpG island 14941 | ||
Tssr43611 | 4 | 32 | - | TSS region | transcription start site region 43611 | |
Cpgi14942 | 4 | 2366 | CpG island | CpG island 14942 | ||
Tssr43612 | 4 | 54 | - | TSS region | transcription start site region 43612 | |
Tssr43613 | 4 | 11 | - | TSS region | transcription start site region 43613 | |
Cpgi14943 | 4 | 808 | CpG island | CpG island 14943 | ||
Tssr39351 | 4 | 44 | + | TSS region | transcription start site region 39351 | |
Mecr | 4 | 24316 | + | protein coding gene | mitochondrial trans-2-enoyl-CoA reductase | |
Tssr1319 | 4 | 1 | - | TSS region | transcription start site region 1319 | |
Cpgi14944 | 4 | 1383 | CpG island | CpG island 14944 | ||
Tssr43614 | 4 | 38 | - | TSS region | transcription start site region 43614 | |
Tssr43615 | 4 | 28 | - | TSS region | transcription start site region 43615 | |
Tssr39352 | 4 | 17 | + | TSS region | transcription start site region 39352 | |
Tssr39353 | 4 | 71 | + | TSS region | transcription start site region 39353 | |
Srsf4 | 4 | 28089 | + | protein coding gene | serine/arginine-rich splicing factor 4 | |
Tssr39354 | 4 | 14 | + | TSS region | transcription start site region 39354 | |
Tssr39355 | 4 | 20 | + | TSS region | transcription start site region 39355 | |
Tssr39356 | 4 | 29 | + | TSS region | transcription start site region 39356 | |
A930004J17Rik | 4 | 4609 | + | unclassified gene | RIKEN cDNA A930004J17 gene | |
4733401A01Rik | 4 | 1514 | unclassified gene | RIKEN cDNA 4733401A01 gene | ||
Gm12992 | 4 | 20551 | - | lncRNA gene | predicted gene 12992 | |
Gm12978 | 4 | 521 | - | pseudogene | predicted gene 12978 | |
Cpgi14945 | 4 | 446 | CpG island | CpG island 14945 | ||
Cpgi14946 | 4 | 572 | CpG island | CpG island 14946 | ||
Cpgi14947 | 4 | 3228 | CpG island | CpG island 14947 | ||
Tssr39357 | 4 | 32 | + | TSS region | transcription start site region 39357 | |
Tssr43616 | 4 | 5 | - | TSS region | transcription start site region 43616 | |
Tssr43617 | 4 | 3 | - | TSS region | transcription start site region 43617 | |
Tssr39358 | 4 | 10 | + | TSS region | transcription start site region 39358 | |
Tssr39359 | 4 | 9 | + | TSS region | transcription start site region 39359 | |
Tssr1320 | 4 | 4 | + | TSS region | transcription start site region 1320 | |
Tmem200b | 4 | 1369 | + | protein coding gene | transmembrane protein 200B | |
Epb41 | 4 | 151908 | - | protein coding gene | erythrocyte membrane protein band 4.1 | |
Nba1 | 4 | 9228551 | QTL | New Zealand Black autoimmunity 1 | ||
Tssr39360 | 4 | 4 | + | TSS region | transcription start site region 39360 | |
Tssr43618 | 4 | 26 | - | TSS region | transcription start site region 43618 | |
Tssr43619 | 4 | 18 | - | TSS region | transcription start site region 43619 | |
Tssr43620 | 4 | 4 | - | TSS region | transcription start site region 43620 | |
Tssr43621 | 4 | 14 | - | TSS region | transcription start site region 43621 | |
Tssr43622 | 4 | 4 | - | TSS region | transcription start site region 43622 | |
Tssr43623 | 4 | 10 | - | TSS region | transcription start site region 43623 | |
Gm27445 | 4 | 71 | - | miRNA gene | predicted gene, 27445 | |
Tssr43624 | 4 | 3 | - | TSS region | transcription start site region 43624 | |
Tssr43625 | 4 | 2 | - | TSS region | transcription start site region 43625 | |
Tssr43626 | 4 | 5 | - | TSS region | transcription start site region 43626 | |
Cpgi14948 | 4 | 1458 | CpG island | CpG island 14948 | ||
Gm13063 | 4 | 783 | + | lincRNA gene | predicted gene 13063 | |
Tssr43627 | 4 | 12 | - | TSS region | transcription start site region 43627 | |
Tssr43628 | 4 | 24 | - | TSS region | transcription start site region 43628 | |
Tssr43629 | 4 | 16 | - | TSS region | transcription start site region 43629 | |
Tssr43630 | 4 | 98 | - | TSS region | transcription start site region 43630 | |
Gm36157 | 4 | 268 | + | lncRNA gene | predicted gene, 36157 | |
Tssr43631 | 4 | 6 | - | TSS region | transcription start site region 43631 | |
Tssr43632 | 4 | 11 | - | TSS region | transcription start site region 43632 | |
Cpgi14949 | 4 | 1174 | CpG island | CpG island 14949 | ||
Gm10300 | 4 | 2295 | + | protein coding gene | predicted gene 10300 | |
Tssr43633 | 4 | 41 | - | TSS region | transcription start site region 43633 | |
Tssr43634 | 4 | 39 | - | TSS region | transcription start site region 43634 | |
Tssr43635 | 4 | 13 | - | TSS region | transcription start site region 43635 | |
Tssr39361 | 4 | 5 | + | TSS region | transcription start site region 39361 | |
Tssr43636 | 4 | 3 | - | TSS region | transcription start site region 43636 | |
Gm13214 | 4 | 407 | + | pseudogene | predicted gene 13214 | |
Gm37711 | 4 | 4533 | - | unclassified gene | predicted gene, 37711 | |
Oprd1 | 4 | 33760 | - | protein coding gene | opioid receptor, delta 1 | |
Cpgi14950 | 4 | 814 | CpG island | CpG island 14950 | ||
n-TAcgc3 | 4 | 71 | + | tRNA gene | nuclear encoded tRNA alanine 3 (anticodon CGC) | |
Cpgi14951 | 4 | 1043 | CpG island | CpG island 14951 | ||
Tssr43637 | 4 | 12 | - | TSS region | transcription start site region 43637 | |
Gm13215 | 4 | 471 | - | pseudogene | predicted gene 13215 | |
Tssr43638 | 4 | 14 | - | TSS region | transcription start site region 43638 | |
D4Mit250b | 4 | 217 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 250b | ||
D4Mit250a | 4 | 128 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 250a | ||
Tssr43639 | 4 | 6 | - | TSS region | transcription start site region 43639 | |
Tssr43640 | 4 | 4 | - | TSS region | transcription start site region 43640 | |
Ythdf2 | 4 | 27340 | - | protein coding gene | YTH N6-methyladenosine RNA binding protein 2 | |
Tssr43641 | 4 | 20 | - | TSS region | transcription start site region 43641 | |
Tssr43642 | 4 | 3 | - | TSS region | transcription start site region 43642 | |
Tssr43643 | 4 | 4 | - | TSS region | transcription start site region 43643 | |
Cpgi14952 | 4 | 1676 | CpG island | CpG island 14952 | ||
Tssr43644 | 4 | 11 | - | TSS region | transcription start site region 43644 | |
Tssr43645 | 4 | 18 | - | TSS region | transcription start site region 43645 | |
Tssr43646 | 4 | 70 | - | TSS region | transcription start site region 43646 | |
Tssr43647 | 4 | 12 | - | TSS region | transcription start site region 43647 | |
Tssr43648 | 4 | 7 | - | TSS region | transcription start site region 43648 | |
Gm22033 | 4 | 89 | - | miRNA gene | predicted gene, 22033 | |
Rps15a-ps4 | 4 | 501 | - | pseudogene | ribosomal protein S15A, pseudogene 4 | |
Tssr43649 | 4 | 4 | - | TSS region | transcription start site region 43649 | |
Gmeb1 | 4 | 40524 | - | protein coding gene | glucocorticoid modulatory element binding protein 1 | |
Gm13252 | 4 | 320 | - | pseudogene | predicted gene 13252 | |
Tssr39362 | 4 | 13 | + | TSS region | transcription start site region 39362 | |
Tssr39363 | 4 | 17 | + | TSS region | transcription start site region 39363 | |
Cpgi14953 | 4 | 1106 | CpG island | CpG island 14953 | ||
Tssr43650 | 4 | 46 | - | TSS region | transcription start site region 43650 | |
Tssr43651 | 4 | 26 | - | TSS region | transcription start site region 43651 | |
Gm28874 | 4 | 3133 | + | lincRNA gene | predicted gene 28874 | |
Gm28872 | 4 | 157 | + | lincRNA gene | predicted gene 28872 | |
Rnu11 | 4 | 107 | - | snRNA gene | U11 small nuclear RNA | |
Cpgi14954 | 4 | 443 | CpG island | CpG island 14954 | ||
Tssr43652 | 4 | 5 | - | TSS region | transcription start site region 43652 | |
Tssr43653 | 4 | 3 | - | TSS region | transcription start site region 43653 | |
Gt(pU21)115Imeg | 4 | 186 | unclassified gene | gene trap 115, Institute of Molecular Embryology and Genetics | ||
Cpgi14955 | 4 | 883 | CpG island | CpG island 14955 | ||
Tssr43654 | 4 | 50 | - | TSS region | transcription start site region 43654 | |
Taf12 | 4 | 18974 | + | protein coding gene | TATA-box binding protein associated factor 12 | |
Tssr39364 | 4 | 14 | + | TSS region | transcription start site region 39364 | |
Tssr39365 | 4 | 48 | + | TSS region | transcription start site region 39365 | |
Tssr39366 | 4 | 11 | + | TSS region | transcription start site region 39366 | |
Rab42 | 4 | 1188 | - | protein coding gene | RAB42, member RAS oncogene family | |
Cpgi14956 | 4 | 467 | CpG island | CpG island 14956 | ||
Tssr43655 | 4 | 13 | - | TSS region | transcription start site region 43655 | |
Tssr43656 | 4 | 29 | - | TSS region | transcription start site region 43656 | |
Tssr43657 | 4 | 19 | - | TSS region | transcription start site region 43657 | |
Cpgi14957 | 4 | 561 | CpG island | CpG island 14957 | ||
Tssr39367 | 4 | 20 | + | TSS region | transcription start site region 39367 | |
Snhg12 | 4 | 2346 | + | lincRNA gene | small nucleolar RNA host gene 12 | |
Snora16a | 4 | 135 | + | snoRNA gene | small nucleolar RNA, H/ACA box 16A | |
Snora44 | 4 | 116 | + | snoRNA gene | small nucleolar RNA, H/ACA box 44 | |
Tssr39368 | 4 | 46 | + | TSS region | transcription start site region 39368 | |
Snora61 | 4 | 61 | + | snoRNA gene | small nucleolar RNA, H/ACA box 61 | |
Tssr39369 | 4 | 5 | + | TSS region | transcription start site region 39369 | |
Snord99 | 4 | 55 | + | snoRNA gene | small nucleolar RNA, C/D box 99 | |
Tssr39370 | 4 | 3 | + | TSS region | transcription start site region 39370 | |
Trnau1ap | 4 | 17775 | - | protein coding gene | tRNA selenocysteine 1 associated protein 1 | |
Cpgi14958 | 4 | 758 | CpG island | CpG island 14958 | ||
Tssr43658 | 4 | 67 | - | TSS region | transcription start site region 43658 | |
Rcc1 | 4 | 13831 | - | protein coding gene | regulator of chromosome condensation 1 | |
Tssr43659 | 4 | 13 | - | TSS region | transcription start site region 43659 | |
Cpgi14959 | 4 | 1040 | CpG island | CpG island 14959 | ||
Tssr1321 | 4 | 10 | - | TSS region | transcription start site region 1321 | |
Tssr43660 | 4 | 22 | - | TSS region | transcription start site region 43660 | |
Tssr43661 | 4 | 3 | - | TSS region | transcription start site region 43661 | |
Tssr1322 | 4 | 5 | - | TSS region | transcription start site region 1322 | |
Tssr43662 | 4 | 6 | - | TSS region | transcription start site region 43662 | |
Tssr43663 | 4 | 9 | - | TSS region | transcription start site region 43663 | |
Tssr39371 | 4 | 9 | + | TSS region | transcription start site region 39371 | |
Gm17300 | 4 | 1610 | + | lincRNA gene | predicted gene, 17300 | |
Snhg3 | 4 | 1753 | - | lncRNA gene | small nucleolar RNA host gene 3 | |
Tssr43664 | 4 | 19 | - | TSS region | transcription start site region 43664 | |
Snora73b | 4 | 204 | - | snoRNA gene | small nucleolar RNA, H/ACA box 73b | |
Snora73a | 4 | 204 | - | snoRNA gene | small nucleolar RNA, H/ACA box 73a | |
Cpgi14960 | 4 | 564 | CpG island | CpG island 14960 | ||
Tssr43665 | 4 | 11 | - | TSS region | transcription start site region 43665 | |
Tssr43666 | 4 | 18 | - | TSS region | transcription start site region 43666 | |
Tssr43667 | 4 | 54 | - | TSS region | transcription start site region 43667 | |
Tssr43668 | 4 | 6 | - | TSS region | transcription start site region 43668 | |
Phactr4 | 4 | 66524 | - | protein coding gene | phosphatase and actin regulator 4 | |
Tssr43669 | 4 | 16 | - | TSS region | transcription start site region 43669 | |
Tssr43670 | 4 | 3 | - | TSS region | transcription start site region 43670 | |
Tssr43671 | 4 | 19 | - | TSS region | transcription start site region 43671 | |
Gm25707 | 4 | 95 | + | miRNA gene | predicted gene, 25707 | |
Cpgi14961 | 4 | 860 | CpG island | CpG island 14961 | ||
Tssr43672 | 4 | 12 | - | TSS region | transcription start site region 43672 | |
Tssr43673 | 4 | 74 | - | TSS region | transcription start site region 43673 | |
Tssr43674 | 4 | 11 | - | TSS region | transcription start site region 43674 | |
Tssr43675 | 4 | 13 | - | TSS region | transcription start site region 43675 | |
Tssr43676 | 4 | 15 | - | TSS region | transcription start site region 43676 | |
Cpgi14962 | 4 | 233 | CpG island | CpG island 14962 | ||
Gm23055 | 4 | 93 | + | snRNA gene | predicted gene, 23055 | |
Med18 | 4 | 5190 | - | protein coding gene | mediator complex subunit 18 | |
Cpgi14963 | 4 | 493 | CpG island | CpG island 14963 | ||
Tssr43677 | 4 | 56 | - | TSS region | transcription start site region 43677 | |
Sesn2 | 4 | 17652 | - | protein coding gene | sestrin 2 | |
Gm12981 | 4 | 6088 | - | antisense lncRNA gene | predicted gene 12981 | |
Cpgi14964 | 4 | 1323 | CpG island | CpG island 14964 | ||
Tssr43678 | 4 | 21 | - | TSS region | transcription start site region 43678 | |
Tssr43679 | 4 | 7 | - | TSS region | transcription start site region 43679 | |
Tssr43680 | 4 | 16 | - | TSS region | transcription start site region 43680 | |
Tssr43681 | 4 | 6 | - | TSS region | transcription start site region 43681 | |
Tssr39372 | 4 | 6 | + | TSS region | transcription start site region 39372 | |
n-TAagc8 | 4 | 71 | + | tRNA gene | nuclear encoded tRNA alanine 8 (anticodon AGC) | |
Atpif1 | 4 | 3104 | - | protein coding gene | ATPase inhibitory factor 1 | |
Tssr43682 | 4 | 55 | - | TSS region | transcription start site region 43682 | |
Tssr39373 | 4 | 15 | + | TSS region | transcription start site region 39373 | |
Tssr43683 | 4 | 44 | - | TSS region | transcription start site region 43683 | |
Tssr39374 | 4 | 27 | + | TSS region | transcription start site region 39374 | |
Gm12999 | 4 | 914 | + | antisense lncRNA gene | predicted gene 12999 | |
Tssr39375 | 4 | 15 | + | TSS region | transcription start site region 39375 | |
Cpgi14965 | 4 | 900 | CpG island | CpG island 14965 | ||
Tssr43684 | 4 | 22 | - | TSS region | transcription start site region 43684 | |
Tssr43685 | 4 | 36 | - | TSS region | transcription start site region 43685 | |
Tssr43686 | 4 | 83 | - | TSS region | transcription start site region 43686 | |
Tssr43687 | 4 | 49 | - | TSS region | transcription start site region 43687 | |
Cpgi14966 | 4 | 770 | CpG island | CpG island 14966 | ||
Tssr39376 | 4 | 43 | + | TSS region | transcription start site region 39376 | |
Dnajc8 | 4 | 18183 | + | protein coding gene | DnaJ heat shock protein family (Hsp40) member C8 | |
Tssr39377 | 4 | 20 | + | TSS region | transcription start site region 39377 | |
Tssr39378 | 4 | 12 | + | TSS region | transcription start site region 39378 | |
Gm24762 | 4 | 103 | - | snRNA gene | predicted gene, 24762 | |
Tssr39379 | 4 | 9 | + | TSS region | transcription start site region 39379 | |
Tssr39380 | 4 | 21 | + | TSS region | transcription start site region 39380 | |
Tssr39381 | 4 | 28 | + | TSS region | transcription start site region 39381 | |
Tssr39382 | 4 | 19 | + | TSS region | transcription start site region 39382 | |
Tssr39383 | 4 | 23 | + | TSS region | transcription start site region 39383 | |
Tssr39384 | 4 | 29 | + | TSS region | transcription start site region 39384 | |
Tssr39385 | 4 | 19 | + | TSS region | transcription start site region 39385 | |
Tssr39386 | 4 | 25 | + | TSS region | transcription start site region 39386 | |
Ptafr | 4 | 18616 | + | protein coding gene | platelet-activating factor receptor |