Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:130893016-131613188

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr39298 4 130905235 to 130905270 35 + TSS region transcription start site region 39298
Gm38599 4 130906051 to 130914563 8512 - lncRNA gene predicted gene, 38599
Tssr39299 4 130913120 to 130913137 17 + TSS region transcription start site region 39299
Laptm5 4 130913125 to 130936141 23016 + protein coding gene lysosomal-associated protein transmembrane 5
Tssr39300 4 130913179 to 130913194 15 + TSS region transcription start site region 39300
Tssr39301 4 130913217 to 130913226 9 + TSS region transcription start site region 39301
Tssr39302 4 130913264 to 130913348 84 + TSS region transcription start site region 39302
Tssr39303 4 130913365 to 130913370 5 + TSS region transcription start site region 39303
Tssr1314 4 130914087 to 130914108 21 - TSS region transcription start site region 1314
Tssr43603 4 130914128 to 130914144 16 - TSS region transcription start site region 43603
Tssr39304 4 130914349 to 130914353 4 + TSS region transcription start site region 39304
Tssr39305 4 130916012 to 130916019 7 + TSS region transcription start site region 39305
Tssr39306 4 130926104 to 130926160 56 + TSS region transcription start site region 39306
Tssr39307 4 130926765 to 130926779 14 + TSS region transcription start site region 39307
Tssr39308 4 130928637 to 130928656 19 + TSS region transcription start site region 39308
Tssr39309 4 130928677 to 130928688 11 + TSS region transcription start site region 39309
Tssr39310 4 130928697 to 130928702 5 + TSS region transcription start site region 39310
Tssr39311 4 130928711 to 130928719 8 + TSS region transcription start site region 39311
Tssr39312 4 130929408 to 130929485 77 + TSS region transcription start site region 39312
Tssr39313 4 130929497 to 130929514 17 + TSS region transcription start site region 39313
Tssr43604 4 130929499 to 130929532 33 - TSS region transcription start site region 43604
Tssr39314 4 130930762 to 130930780 18 + TSS region transcription start site region 39314
Tssr39315 4 130930784 to 130930802 18 + TSS region transcription start site region 39315
Tssr39316 4 130930836 to 130930847 11 + TSS region transcription start site region 39316
Tssr39317 4 130932012 to 130932025 13 + TSS region transcription start site region 39317
Tssr1315 4 130932125 to 130932132 7 + TSS region transcription start site region 1315
Tssr39318 4 130932133 to 130932144 11 + TSS region transcription start site region 39318
Tssr39319 4 130932161 to 130932177 16 + TSS region transcription start site region 39319
Tssr39320 4 130932232 to 130932239 7 + TSS region transcription start site region 39320
Tssr39321 4 130932248 to 130932258 10 + TSS region transcription start site region 39321
Tssr39322 4 130932300 to 130932311 11 + TSS region transcription start site region 39322
Tssr39323 4 130932313 to 130932325 12 + TSS region transcription start site region 39323
Tssr39324 4 130932349 to 130932356 7 + TSS region transcription start site region 39324
Tssr39325 4 130932359 to 130932370 11 + TSS region transcription start site region 39325
Tssr39326 4 130932374 to 130932391 17 + TSS region transcription start site region 39326
Tssr39327 4 130932395 to 130932410 15 + TSS region transcription start site region 39327
Tssr39328 4 130932418 to 130932436 18 + TSS region transcription start site region 39328
Tssr39329 4 130932458 to 130932555 97 + TSS region transcription start site region 39329
Tssr39330 4 130932556 to 130932612 56 + TSS region transcription start site region 39330
Tssr39331 4 130932617 to 130932644 27 + TSS region transcription start site region 39331
Tssr39332 4 130934457 to 130934468 11 + TSS region transcription start site region 39332
Tssr39333 4 130934480 to 130934483 3 + TSS region transcription start site region 39333
Tssr39334 4 130934508 to 130934532 24 + TSS region transcription start site region 39334
Tssr43605 4 130934543 to 130934573 30 - TSS region transcription start site region 43605
Tssr39335 4 130934545 to 130934550 5 + TSS region transcription start site region 39335
Tssr39336 4 130934559 to 130934566 7 + TSS region transcription start site region 39336
Tssr39337 4 130934581 to 130934593 12 + TSS region transcription start site region 39337
Tssr39338 4 130934615 to 130934626 11 + TSS region transcription start site region 39338
Tssr39339 4 130934639 to 130934673 34 + TSS region transcription start site region 39339
Tssr39340 4 130934716 to 130934721 5 + TSS region transcription start site region 39340
Tssr39341 4 130934732 to 130934739 7 + TSS region transcription start site region 39341
Tssr43606 4 130934788 to 130934832 44 - TSS region transcription start site region 43606
Tssr39342 4 130934814 to 130934825 11 + TSS region transcription start site region 39342
Tssr39343 4 130934834 to 130934846 12 + TSS region transcription start site region 39343
Tssr39344 4 130934894 to 130934907 13 + TSS region transcription start site region 39344
Tssr39345 4 130934930 to 130934944 14 + TSS region transcription start site region 39345
Tssr39346 4 130934946 to 130934959 13 + TSS region transcription start site region 39346
Tssr43607 4 130935072 to 130935114 42 - TSS region transcription start site region 43607
Tssr39347 4 130935492 to 130935513 21 + TSS region transcription start site region 39347
Tssr39348 4 130936003 to 130936031 28 + TSS region transcription start site region 39348
Tssr39349 4 130936048 to 130936069 21 + TSS region transcription start site region 39349
Tssr43608 4 130936136 to 130936139 3 - TSS region transcription start site region 43608
Tssr39350 4 130944377 to 130944391 14 + TSS region transcription start site region 39350
Matn1 4 130944385 to 130955475 11090 + protein coding gene matrilin 1, cartilage matrix protein
Cpgi14937 4 130949823 to 130950221 398 CpG island CpG island 14937
Gm12973 4 130974742 to 131001225 26483 + lincRNA gene predicted gene 12973
A930031H19Rik 4 131000832 to 131010474 9642 - lincRNA gene RIKEN cDNA A930031H19 gene
Tssr1316 4 131046574 to 131046576 2 + TSS region transcription start site region 1316
Gm42317 4 131063855 to 131065645 1790 - lncRNA gene predicted gene, 42317
Gm35482 4 131075667 to 131080271 4604 - lncRNA gene predicted gene, 35482
Gm42318 4 131156346 to 131162675 6329 + lncRNA gene predicted gene, 42318
Gm25261 4 131239277 to 131239410 133 + snoRNA gene predicted gene, 25261
Cpgi14938 4 131253016 to 131253188 172 CpG island CpG island 14938
Cpgi14939 4 131356441 to 131356608 167 CpG island CpG island 14939
Tssr1317 4 131389980 to 131389995 15 + TSS region transcription start site region 1317
Gm35634 4 131409139 to 131428303 19164 + lncRNA gene predicted gene, 35634
Gm46723 4 131456305 to 131482614 26309 + lncRNA gene predicted gene, 46723
Gm35779 4 131458415 to 131485455 27040 - lncRNA gene predicted gene, 35779
Gm831 4 131491310 to 131503058 11748 + lincRNA gene predicted gene 831
Tssr1318 4 131572921 to 131572924 3 + TSS region transcription start site region 1318