Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:130756069-130817855

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pum1 4 130663321 to 130781564 118243 + protein coding gene pumilio RNA-binding family member 1
Gm12971 4 130758563 to 130762379 3816 + sense intronic lncRNA gene predicted gene 12971
Gm24091 4 130766331 to 130766413 82 + snoRNA gene predicted gene, 24091
Gm26516 4 130774817 to 130779246 4429 - lincRNA gene predicted gene, 26516
Gm23711 4 130775741 to 130775823 82 + snoRNA gene predicted gene, 23711
Tssr39249 4 130783733 to 130783734 1 + TSS region transcription start site region 39249
Gm12972 4 130786069 to 130787855 1786 + lincRNA gene predicted gene 12972
Cpgi14935 4 130791853 to 130793443 1590 CpG island CpG island 14935
Tssr39250 4 130792105 to 130792132 27 + TSS region transcription start site region 39250
Tssr39251 4 130792134 to 130792148 14 + TSS region transcription start site region 39251
Tssr39252 4 130792307 to 130792320 13 + TSS region transcription start site region 39252
Tssr39253 4 130792480 to 130792508 28 + TSS region transcription start site region 39253
Tssr39254 4 130792513 to 130792667 154 + TSS region transcription start site region 39254
Sdc3 4 130792537 to 130826318 33781 + protein coding gene syndecan 3
Tssr39255 4 130792694 to 130792720 26 + TSS region transcription start site region 39255
Tssr39256 4 130792739 to 130792769 30 + TSS region transcription start site region 39256
Tssr39257 4 130793734 to 130793768 34 + TSS region transcription start site region 39257
Tssr39258 4 130795359 to 130795364 5 + TSS region transcription start site region 39258
Gm12970 4 130811617 to 130812326 709 - antisense lncRNA gene predicted gene 12970
Tssr39259 4 130811662 to 130811673 11 + TSS region transcription start site region 39259
Tssr39260 4 130811678 to 130811699 21 + TSS region transcription start site region 39260
Tssr43598 4 130812446 to 130812478 32 - TSS region transcription start site region 43598
Tssr39261 4 130812562 to 130812570 8 + TSS region transcription start site region 39261
Tssr39262 4 130812591 to 130812601 10 + TSS region transcription start site region 39262
Tssr39263 4 130816839 to 130816853 14 + TSS region transcription start site region 39263
Tssr39264 4 130816873 to 130816911 38 + TSS region transcription start site region 39264