Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:13066590-13746771

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11820 4 13091351 to 13108752 17401 + lincRNA gene predicted gene 11820
Tssr36511 4 13096490 to 13096501 11 + TSS region transcription start site region 36511
Gm46847 4 13108782 to 13117434 8652 + lncRNA gene predicted gene, 46847
Gm26250 4 13266985 to 13267050 65 - miRNA gene predicted gene, 26250
Gm46880 4 13282641 to 13307489 24848 + lncRNA gene predicted gene, 46880
D4Mit100 4 13406590 to 13406771 181 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 100
Gm20032 4 13444763 to 13447593 2830 - pseudogene predicted gene, 20032
Gm11819 4 13444770 to 13445141 371 + pseudogene predicted gene 11819
Gm11826 4 13482755 to 13483192 437 - pseudogene predicted gene 11826
Tssr40955 4 13483227 to 13483237 10 - TSS region transcription start site region 40955
Gm46881 4 13515142 to 13519253 4111 - lncRNA gene predicted gene, 46881
Tssr36512 4 13517176 to 13517184 8 + TSS region transcription start site region 36512
Gm36488 4 13561170 to 13586612 25442 - lncRNA gene predicted gene, 36488
Gm36438 4 13585545 to 13595709 10164 + lncRNA gene predicted gene, 36438
Gm11825 4 13606034 to 13606769 735 + pseudogene predicted gene 11825
0610009K14Rik 4 13609844 to 13668729 58885 unclassified gene RIKEN cDNA 0610009K14 gene
Gm23162 4 13622643 to 13622763 120 - miRNA gene predicted gene, 23162
Cpgi14047 4 13742749 to 13744002 1253 CpG island CpG island 14047
Tssr36513 4 13742775 to 13742810 35 + TSS region transcription start site region 36513
Tssr36514 4 13743294 to 13743316 22 + TSS region transcription start site region 36514
Tssr36515 4 13743352 to 13743379 27 + TSS region transcription start site region 36515
Tssr36516 4 13743424 to 13743478 54 + TSS region transcription start site region 36516
Runx1t1 4 13743436 to 13893649 150213 + protein coding gene RUNX1 translocation partner 1
Tssr36517 4 13743479 to 13743510 31 + TSS region transcription start site region 36517
Tssr36518 4 13743514 to 13743534 20 + TSS region transcription start site region 36518
Cpgi14048 4 13744356 to 13744599 243 CpG island CpG island 14048