Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:130653321-130791564

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14934 4 130662787 to 130664252 1465 CpG island CpG island 14934
Tssr39239 4 130663212 to 130663224 12 + TSS region transcription start site region 39239
Tssr39240 4 130663277 to 130663294 17 + TSS region transcription start site region 39240
Pum1 4 130663321 to 130781564 118243 + protein coding gene pumilio RNA-binding family member 1
Tssr39241 4 130663353 to 130663412 59 + TSS region transcription start site region 39241
Tssr39242 4 130663417 to 130663420 3 + TSS region transcription start site region 39242
Tssr1313 4 130663674 to 130663701 27 + TSS region transcription start site region 1313
Tssr39243 4 130663802 to 130663805 3 + TSS region transcription start site region 39243
Tssr39244 4 130670202 to 130670206 4 + TSS region transcription start site region 39244
Tssr39245 4 130680861 to 130680865 4 + TSS region transcription start site region 39245
Tssr39246 4 130681245 to 130681247 2 + TSS region transcription start site region 39246
2810017D21Rik 4 130709671 to 130710489 818 unclassified gene RIKEN cDNA 2810017D21 gene
Tssr39247 4 130709696 to 130709703 7 + TSS region transcription start site region 39247
Tssr39248 4 130727640 to 130727644 4 + TSS region transcription start site region 39248
Snord85 4 130749638 to 130749702 64 + snoRNA gene small nucleolar RNA, C/D box 85
Gm12971 4 130758563 to 130762379 3816 + sense intronic lncRNA gene predicted gene 12971
Gm24091 4 130766331 to 130766413 82 + snoRNA gene predicted gene, 24091
Gm26516 4 130774817 to 130779246 4429 - lincRNA gene predicted gene, 26516
Gm23711 4 130775741 to 130775823 82 + snoRNA gene predicted gene, 23711
Tssr39249 4 130783733 to 130783734 1 + TSS region transcription start site region 39249
Gm12972 4 130786069 to 130787855 1786 + lincRNA gene predicted gene 12972