MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:130644671-130775489

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi14934	4	130662787 to 130664252	1465		CpG island	CpG island 14934
Tssr39239	4	130663212 to 130663224	12	+	TSS region	transcription start site region 39239
Tssr39240	4	130663277 to 130663294	17	+	TSS region	transcription start site region 39240
Pum1	4	130663321 to 130781564	118243	+	protein coding gene	pumilio RNA-binding family member 1
Tssr39241	4	130663353 to 130663412	59	+	TSS region	transcription start site region 39241
Tssr39242	4	130663417 to 130663420	3	+	TSS region	transcription start site region 39242
Tssr1313	4	130663674 to 130663701	27	+	TSS region	transcription start site region 1313
Tssr39243	4	130663802 to 130663805	3	+	TSS region	transcription start site region 39243
Tssr39244	4	130670202 to 130670206	4	+	TSS region	transcription start site region 39244
Tssr39245	4	130680861 to 130680865	4	+	TSS region	transcription start site region 39245
Tssr39246	4	130681245 to 130681247	2	+	TSS region	transcription start site region 39246
2810017D21Rik	4	130709671 to 130710489	818		unclassified gene	RIKEN cDNA 2810017D21 gene
Tssr39247	4	130709696 to 130709703	7	+	TSS region	transcription start site region 39247
Tssr39248	4	130727640 to 130727644	4	+	TSS region	transcription start site region 39248
Snord85	4	130749638 to 130749702	64	+	snoRNA gene	small nucleolar RNA, C/D box 85
Gm12971	4	130758563 to 130762379	3816	+	sense intronic lncRNA gene	predicted gene 12971
Gm24091	4	130766331 to 130766413	82	+	snoRNA gene	predicted gene, 24091
Gm26516	4	130774817 to 130779246	4429	-	lincRNA gene	predicted gene, 26516