Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:130194915-130524966

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14926 4 130198973 to 130199575 602 CpG island CpG island 14926
Gm853 4 130209109 to 130222401 13292 - protein coding gene predicted gene 853
Tssr43576 4 130222326 to 130222349 23 - TSS region transcription start site region 43576
Gm46724 4 130236579 to 130249079 12500 + lncRNA gene predicted gene, 46724
Serinc2 4 130253495 to 130279200 25705 - protein coding gene serine incorporator 2
Cpgi14927 4 130264771 to 130265050 279 CpG island CpG island 14927
Cpgi14928 4 130274830 to 130275838 1008 CpG island CpG island 14928
Tssr43577 4 130275199 to 130275210 11 - TSS region transcription start site region 43577
Tssr43578 4 130275213 to 130275228 15 - TSS region transcription start site region 43578
Tssr43579 4 130275523 to 130275537 14 - TSS region transcription start site region 43579
Tssr43580 4 130275542 to 130275590 48 - TSS region transcription start site region 43580
Gm34957 4 130275656 to 130280859 5203 + lncRNA gene predicted gene, 34957
Tssr43581 4 130279217 to 130279231 14 - TSS region transcription start site region 43581
Tssr1310 4 130295432 to 130295436 4 - TSS region transcription start site region 1310
Tssr43582 4 130307509 to 130307519 10 - TSS region transcription start site region 43582
Cpgi14929 4 130307783 to 130309205 1422 CpG island CpG island 14929
Gm10570 4 130308162 to 130308674 512 - unclassified gene predicted gene 10570
Tssr39234 4 130308604 to 130308653 49 + TSS region transcription start site region 39234
Tssr39235 4 130308731 to 130308752 21 + TSS region transcription start site region 39235
Fabp3 4 130308778 to 130315463 6685 + protein coding gene fatty acid binding protein 3, muscle and heart
Zcchc17 4 130315902 to 130359963 44061 - protein coding gene zinc finger, CCHC domain containing 17
Gm35074 4 130317693 to 130333346 15653 + lncRNA gene predicted gene, 35074
Tssr43583 4 130334898 to 130334902 4 - TSS region transcription start site region 43583
Cpgi14930 4 130359665 to 130360522 857 CpG island CpG island 14930
Tssr43584 4 130359915 to 130359966 51 - TSS region transcription start site region 43584
Snrnp40 4 130360132 to 130390026 29894 + protein coding gene small nuclear ribonucleoprotein 40 (U5)
Tssr39236 4 130360159 to 130360208 49 + TSS region transcription start site region 39236
Tssr39237 4 130366858 to 130366865 7 + TSS region transcription start site region 39237
2900017G11Rik 4 130379909 to 130380784 875 unclassified gene RIKEN cDNA 2900017G11 gene
Tssr43585 4 130519663 to 130519682 19 - TSS region transcription start site region 43585
Tssr43586 4 130519833 to 130519844 11 - TSS region transcription start site region 43586
Cpgi14933 4 130519890 to 130520557 667 CpG island CpG island 14933
Tssr43587 4 130519977 to 130519983 6 - TSS region transcription start site region 43587
Tssr43588 4 130520006 to 130520023 17 - TSS region transcription start site region 43588
Tssr43589 4 130520110 to 130520133 23 - TSS region transcription start site region 43589
Tssr43590 4 130520184 to 130520207 23 - TSS region transcription start site region 43590
Tssr43591 4 130520213 to 130520224 11 - TSS region transcription start site region 43591
Tssr43592 4 130520243 to 130520263 20 - TSS region transcription start site region 43592
Tssr1311 4 130520508 to 130520556 48 + TSS region transcription start site region 1311
Tssr39238 4 130520730 to 130520749 19 + TSS region transcription start site region 39238