Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:129559500-129809571

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nidds 4 115173580 to 129572122 14398542 QTL non-insulin-dependent diabetes mellitus in SJL
Lck 4 129548344 to 129573641 25297 - protein coding gene lymphocyte protein tyrosine kinase
Tssr39175 4 129570264 to 129570306 42 + TSS region transcription start site region 39175
Lrdg2 4 129572018 to 151570093 21998075 QTL light induced retinal degeneration 2
Tlsr3 4 129572018 to 137137225 7565207 QTL thymic lymphoma suppressor region 3
D4Mit203 4 129572018 to 129572122 104 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 203
Tssr43523 4 129572375 to 129572385 10 - TSS region transcription start site region 43523
Tssr43524 4 129572410 to 129572416 6 - TSS region transcription start site region 43524
Tssr39176 4 129572569 to 129572587 18 + TSS region transcription start site region 39176
Tssr43525 4 129573570 to 129573598 28 - TSS region transcription start site region 43525
Tssr43526 4 129573599 to 129573629 30 - TSS region transcription start site region 43526
Tssr43527 4 129573637 to 129573652 15 - TSS region transcription start site region 43527
Tssr39177 4 129573757 to 129573768 11 + TSS region transcription start site region 39177
Tssr43528 4 129575196 to 129575201 5 - TSS region transcription start site region 43528
Tssr43529 4 129575286 to 129575297 11 - TSS region transcription start site region 43529
Tssr43530 4 129575345 to 129575352 7 - TSS region transcription start site region 43530
Tssr43531 4 129575388 to 129575401 13 - TSS region transcription start site region 43531
Tssr39178 4 129575635 to 129575651 16 + TSS region transcription start site region 39178
Fam167b 4 129576815 to 129578549 1734 - protein coding gene family with sequence similarity 167, member B
Tssr43532 4 129578512 to 129578517 5 - TSS region transcription start site region 43532
Tssr43533 4 129578521 to 129578532 11 - TSS region transcription start site region 43533
Tssr43534 4 129578535 to 129578560 25 - TSS region transcription start site region 43534
Cpgi14901 4 129584907 to 129585454 547 CpG island CpG island 14901
Eif3i 4 129591974 to 129600648 8674 - protein coding gene eukaryotic translation initiation factor 3, subunit I
Tssr43535 4 129595109 to 129595113 4 - TSS region transcription start site region 43535
Tssr43536 4 129595168 to 129595193 25 - TSS region transcription start site region 43536
Cpgi14902 4 129600117 to 129601193 1076 CpG island CpG island 14902
Tssr43537 4 129600586 to 129600595 9 - TSS region transcription start site region 43537
Tssr43538 4 129600608 to 129600639 31 - TSS region transcription start site region 43538
Tssr43539 4 129600642 to 129600653 11 - TSS region transcription start site region 43539
Tssr39179 4 129600670 to 129600715 45 + TSS region transcription start site region 39179
Tmem234 4 129600691 to 129608533 7842 + protein coding gene transmembrane protein 234
Dcdc2b 4 129608331 to 129614257 5926 - protein coding gene doublecortin domain containing 2b
Tssr43540 4 129614261 to 129614280 19 - TSS region transcription start site region 43540
Iqcc 4 129615617 to 129619107 3490 - protein coding gene IQ motif containing C
Cpgi14903 4 129618786 to 129619480 694 CpG island CpG island 14903
Tssr43541 4 129619052 to 129619063 11 - TSS region transcription start site region 43541
Tssr43542 4 129619069 to 129619118 49 - TSS region transcription start site region 43542
Ccdc28b 4 129619274 to 129623908 4634 - protein coding gene coiled coil domain containing 28B
Tssr43543 4 129621392 to 129621427 35 - TSS region transcription start site region 43543
Tssr43544 4 129622945 to 129622952 7 - TSS region transcription start site region 43544
Gm34305 4 129623106 to 129624060 954 + lncRNA gene predicted gene, 34305
Tssr43545 4 129623870 to 129623925 55 - TSS region transcription start site region 43545
2810452K05Rik 4 129624253 to 129625071 818 unclassified gene RIKEN cDNA 2810452K05 gene
Txlna 4 129626078 to 129641065 14987 - protein coding gene taxilin alpha
Tgq17 4 129629696 to 129629696 0 QTL triglyceride QTL 17
Cpgi14904 4 129640509 to 129641243 734 CpG island CpG island 14904
Tssr43546 4 129640614 to 129640660 46 - TSS region transcription start site region 43546
Tssr43547 4 129640691 to 129640725 34 - TSS region transcription start site region 43547
Tssr1307 4 129640967 to 129640978 11 - TSS region transcription start site region 1307
Tssr43548 4 129640991 to 129641051 60 - TSS region transcription start site region 43548
Tssr43549 4 129641060 to 129641080 20 - TSS region transcription start site region 43549
Kpna6 4 129643980 to 129672767 28787 - protein coding gene karyopherin (importin) alpha 6
Tssr43550 4 129647491 to 129647518 27 - TSS region transcription start site region 43550
Tssr39180 4 129650240 to 129650243 3 + TSS region transcription start site region 39180
Tssr43551 4 129662442 to 129662485 43 - TSS region transcription start site region 43551
Cpgi14905 4 129672097 to 129673101 1004 CpG island CpG island 14905
Tssr43552 4 129672697 to 129672708 11 - TSS region transcription start site region 43552
Tssr43553 4 129672712 to 129672774 62 - TSS region transcription start site region 43553
Tssr43554 4 129672782 to 129672793 11 - TSS region transcription start site region 43554
Tmem39b 4 129676355 to 129696838 20483 - protein coding gene transmembrane protein 39b
Mir7016 4 129684500 to 129684571 71 - miRNA gene microRNA 7016
Tssr43555 4 129684735 to 129684745 10 - TSS region transcription start site region 43555
Cpgi14906 4 129696249 to 129697174 925 CpG island CpG island 14906
Tssr43556 4 129696579 to 129696602 23 - TSS region transcription start site region 43556
Tssr43557 4 129696734 to 129696743 9 - TSS region transcription start site region 43557
Tssr43558 4 129696758 to 129696804 46 - TSS region transcription start site region 43558
Tssr43559 4 129696817 to 129696843 26 - TSS region transcription start site region 43559
Tssr43560 4 129696849 to 129696860 11 - TSS region transcription start site region 43560
Khdrbs1 4 129703164 to 129742303 39139 - protein coding gene KH domain containing, RNA binding, signal transduction associated 1
Cpgi14907 4 129741256 to 129742978 1722 CpG island CpG island 14907
Tssr43561 4 129742180 to 129742189 9 - TSS region transcription start site region 43561
Tssr43562 4 129742233 to 129742268 35 - TSS region transcription start site region 43562
Tssr43563 4 129742275 to 129742312 37 - TSS region transcription start site region 43563
Gm12967 4 129761628 to 129761916 288 - pseudogene predicted gene 12967
Gm28017 4 129762311 to 129762436 125 - miRNA gene predicted gene, 28017
Tssr39181 4 129772545 to 129772566 21 + TSS region transcription start site region 39181
Tssr39182 4 129795715 to 129795747 32 + TSS region transcription start site region 39182