MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:129246557-129306900

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
C77080	4	129219578 to 129261404	41826	-	protein coding gene	expressed sequence C77080
Cpgi14885	4	129247741 to 129248911	1170		CpG island	CpG island 14885
Tssr43486	4	129248415 to 129248430	15	-	TSS region	transcription start site region 43486
Tssr43487	4	129248431 to 129248498	67	-	TSS region	transcription start site region 43487
Tssr43488	4	129261394 to 129261406	12	-	TSS region	transcription start site region 43488
Gm12976	4	129261965 to 129265010	3045	+	lincRNA gene	predicted gene 12976
Tssr43489	4	129263475 to 129263482	7	-	TSS region	transcription start site region 43489
Tssr43490	4	129268770 to 129268828	58	-	TSS region	transcription start site region 43490
Cpgi14886	4	129276557 to 129276900	343		CpG island	CpG island 14886
Gm22994	4	129282865 to 129282946	81	-	miRNA gene	predicted gene, 22994
Cpgi14887	4	129286937 to 129288231	1294		CpG island	CpG island 14887
Tssr39133	4	129287614 to 129287644	30	+	TSS region	transcription start site region 39133
Sync	4	129287617 to 129308559	20942	+	protein coding gene	syncoilin
Tssr39134	4	129287646 to 129287666	20	+	TSS region	transcription start site region 39134
Tssr39135	4	129287673 to 129287685	12	+	TSS region	transcription start site region 39135
Tssr39136	4	129287698 to 129287713	15	+	TSS region	transcription start site region 39136
Tssr39137	4	129287722 to 129287738	16	+	TSS region	transcription start site region 39137
Cpgi14888	4	129293403 to 129294159	756		CpG island	CpG island 14888