Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:129108005-129229727

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem54 4 129105548 to 129111626 6078 + protein coding gene transmembrane protein 54
Hpca 4 129111570 to 129122036 10466 - protein coding gene hippocalcin
Tssr43457 4 129111794 to 129111830 36 - TSS region transcription start site region 43457
Tssr43458 4 129111839 to 129111852 13 - TSS region transcription start site region 43458
Tssr43459 4 129111864 to 129111881 17 - TSS region transcription start site region 43459
Tssr43460 4 129111975 to 129111991 16 - TSS region transcription start site region 43460
Tssr43461 4 129112089 to 129112101 12 - TSS region transcription start site region 43461
Cpgi14876 4 129113106 to 129113447 341 CpG island CpG island 14876
Tssr43462 4 129118709 to 129118716 7 - TSS region transcription start site region 43462
Tssr43463 4 129118726 to 129118732 6 - TSS region transcription start site region 43463
Cpgi14877 4 129120656 to 129121971 1315 CpG island CpG island 14877
Tssr43464 4 129121234 to 129121315 81 - TSS region transcription start site region 43464
Tssr43465 4 129121581 to 129121600 19 - TSS region transcription start site region 43465
Tssr43466 4 129121601 to 129121624 23 - TSS region transcription start site region 43466
Tssr43467 4 129121647 to 129121662 15 - TSS region transcription start site region 43467
Tssr43468 4 129121699 to 129121734 35 - TSS region transcription start site region 43468
Tssr43469 4 129122052 to 129122063 11 - TSS region transcription start site region 43469
Tssr43470 4 129122064 to 129122095 31 - TSS region transcription start site region 43470
Cpgi14878 4 129125904 to 129126134 230 CpG island CpG island 14878
Gm15906 4 129135091 to 129136910 1819 + lincRNA gene predicted gene 15906
Cpgi14879 4 129136206 to 129137682 1476 CpG island CpG island 14879
Tssr39124 4 129136684 to 129136704 20 + TSS region transcription start site region 39124
Tssr39125 4 129136859 to 129136876 17 + TSS region transcription start site region 39125
Tssr39126 4 129136877 to 129136903 26 + TSS region transcription start site region 39126
Tssr39127 4 129136920 to 129136941 21 + TSS region transcription start site region 39127
Tssr39128 4 129136948 to 129136973 25 + TSS region transcription start site region 39128
Fndc5 4 129136999 to 129144593 7594 + protein coding gene fibronectin type III domain containing 5
S100pbp 4 129148005 to 129189727 41722 - protein coding gene S100P binding protein
Cpgi14880 4 129188779 to 129190354 1575 CpG island CpG island 14880
Tssr43471 4 129189431 to 129189448 17 - TSS region transcription start site region 43471
Tssr1305 4 129189458 to 129189483 25 - TSS region transcription start site region 1305
Tssr43472 4 129189569 to 129189594 25 - TSS region transcription start site region 43472
Tssr43473 4 129189600 to 129189631 31 - TSS region transcription start site region 43473
Tssr43474 4 129189646 to 129189697 51 - TSS region transcription start site region 43474
Yars 4 129189765 to 129219607 29842 + protein coding gene tyrosyl-tRNA synthetase
Tssr39129 4 129189863 to 129189956 93 + TSS region transcription start site region 39129
D4Ertd100e 4 129206668 to 129206900 232 DNA segment DNA segment, Chr 4, ERATO Doi 100, expressed
C77080 4 129219578 to 129261404 41826 - protein coding gene expressed sequence C77080
Tssr43475 4 129222377 to 129222391 14 - TSS region transcription start site region 43475
Tssr43476 4 129222716 to 129222733 17 - TSS region transcription start site region 43476
Tssr43477 4 129223138 to 129223153 15 - TSS region transcription start site region 43477
Tssr43478 4 129223245 to 129223256 11 - TSS region transcription start site region 43478
Cpgi14881 4 129223463 to 129224468 1005 CpG island CpG island 14881
Cpgi14882 4 129227556 to 129227768 212 CpG island CpG island 14882
Tssr43479 4 129227857 to 129227879 22 - TSS region transcription start site region 43479
Tssr43480 4 129227883 to 129227923 40 - TSS region transcription start site region 43480
Tssr43481 4 129228575 to 129228592 17 - TSS region transcription start site region 43481