MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:128513609-128723625

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Csmd2	4	127987857 to 128567656	579799	+	protein coding gene	CUB and Sushi multiple domains 2
Gm33656	4	128506211 to 128533358	27147	-	lncRNA gene	predicted gene, 33656
Cpgi14854	4	128546602 to 128546861	259		CpG island	CpG island 14854
Zscan20	4	128583539 to 128610098	26559	-	protein coding gene	zinc finger and SCAN domains 20
Cpgi14855	4	128609667 to 128610276	609		CpG island	CpG island 14855
Tlr12	4	128615446 to 128618619	3173	-	protein coding gene	toll-like receptor 12
Tssr43437	4	128618316 to 128618327	11	-	TSS region	transcription start site region 43437
Tssr43438	4	128618572 to 128618597	25	-	TSS region	transcription start site region 43438
Tssr43439	4	128618609 to 128618625	16	-	TSS region	transcription start site region 43439
Tssr43440	4	128618628 to 128618646	18	-	TSS region	transcription start site region 43440
Cpgi14856	4	128630146 to 128630585	439		CpG island	CpG island 14856
Gm12958	4	128637471 to 128638447	976	+	lincRNA gene	predicted gene 12958
Cpgi14857	4	128654453 to 128655415	962		CpG island	CpG island 14857
Tssr39068	4	128654686 to 128654729	43	+	TSS region	transcription start site region 39068
Phc2	4	128654702 to 128752881	98179	+	protein coding gene	polyhomeotic 2
Tssr39069	4	128688726 to 128688750	24	+	TSS region	transcription start site region 39069
Cpgi14858	4	128711599 to 128711807	208		CpG island	CpG island 14858
Tssr39070	4	128711843 to 128711879	36	+	TSS region	transcription start site region 39070
Tssr39071	4	128722181 to 128722191	10	+	TSS region	transcription start site region 39071