Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:128473628-128763646

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csmd2 4 127987857 to 128567656 579799 + protein coding gene CUB and Sushi multiple domains 2
Gm33656 4 128506211 to 128533358 27147 - lncRNA gene predicted gene, 33656
Cpgi14854 4 128546602 to 128546861 259 CpG island CpG island 14854
Zscan20 4 128583539 to 128610098 26559 - protein coding gene zinc finger and SCAN domains 20
Cpgi14855 4 128609667 to 128610276 609 CpG island CpG island 14855
Tlr12 4 128615446 to 128618619 3173 - protein coding gene toll-like receptor 12
Tssr43437 4 128618316 to 128618327 11 - TSS region transcription start site region 43437
Tssr43438 4 128618572 to 128618597 25 - TSS region transcription start site region 43438
Tssr43439 4 128618609 to 128618625 16 - TSS region transcription start site region 43439
Tssr43440 4 128618628 to 128618646 18 - TSS region transcription start site region 43440
Cpgi14856 4 128630146 to 128630585 439 CpG island CpG island 14856
Gm12958 4 128637471 to 128638447 976 + lincRNA gene predicted gene 12958
Cpgi14857 4 128654453 to 128655415 962 CpG island CpG island 14857
Tssr39068 4 128654686 to 128654729 43 + TSS region transcription start site region 39068
Phc2 4 128654702 to 128752881 98179 + protein coding gene polyhomeotic 2
Tssr39069 4 128688726 to 128688750 24 + TSS region transcription start site region 39069
Cpgi14858 4 128711599 to 128711807 208 CpG island CpG island 14858
Tssr39070 4 128711843 to 128711879 36 + TSS region transcription start site region 39070
Tssr39071 4 128722181 to 128722191 10 + TSS region transcription start site region 39071
Cpgi14859 4 128726941 to 128728425 1484 CpG island CpG island 14859
Tssr39072 4 128727568 to 128727579 11 + TSS region transcription start site region 39072
Tssr39073 4 128727589 to 128727644 55 + TSS region transcription start site region 39073
Tssr39074 4 128743433 to 128743452 19 + TSS region transcription start site region 39074
Tssr39075 4 128744990 to 128745009 19 + TSS region transcription start site region 39075
Tssr39076 4 128745049 to 128745067 18 + TSS region transcription start site region 39076
Tssr43441 4 128745084 to 128745128 44 - TSS region transcription start site region 43441
Tssr39077 4 128747124 to 128747144 20 + TSS region transcription start site region 39077
Cpgi14860 4 128747920 to 128748234 314 CpG island CpG island 14860
Tssr39078 4 128752054 to 128752091 37 + TSS region transcription start site region 39078
A3galt2 4 128759258 to 128770201 10943 + protein coding gene alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase)