MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:127202313-127322318

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dlgap3	4	127169204 to 127237022	67818	+	protein coding gene	DLG associated protein 3
Tssr39056	4	127208291 to 127208303	12	+	TSS region	transcription start site region 39056
Tssr39057	4	127210307 to 127210329	22	+	TSS region	transcription start site region 39057
Cpgi14841	4	127214292 to 127215019	727		CpG island	CpG island 14841
Tssr39058	4	127214745 to 127214777	32	+	TSS region	transcription start site region 39058
Cpgi14842	4	127233496 to 127233994	498		CpG island	CpG island 14842
Cpgi14843	4	127235390 to 127236944	1554		CpG island	CpG island 14843
Cpgi14844	4	127243546 to 127244336	790		CpG island	CpG island 14844
Smim12	4	127243784 to 127247809	4025	+	protein coding gene	small integral membrane protein 12
Tssr39059	4	127243788 to 127243856	68	+	TSS region	transcription start site region 39059
Gm33269	4	127248669 to 127313366	64697	+	lncRNA gene	predicted gene, 33269
Cpgi14845	4	127251798 to 127252279	481		CpG island	CpG island 14845
Tssr43415	4	127252367 to 127252390	23	-	TSS region	transcription start site region 43415
Tssr39060	4	127262313 to 127262318	5	+	TSS region	transcription start site region 39060
Gm22221	4	127284731 to 127284833	102	-	snRNA gene	predicted gene, 22221
Gm12948	4	127296916 to 127297475	559	-	pseudogene	predicted gene 12948
Gja4	4	127311421 to 127314039	2618	-	protein coding gene	gap junction protein, alpha 4
Cpgi14846	4	127313777 to 127314223	446		CpG island	CpG island 14846
Tssr43416	4	127313980 to 127313998	18	-	TSS region	transcription start site region 43416