Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:126469945-126749952

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12929 4 126476302 to 126476671 369 - pseudogene predicted gene 12929
Gm12928 4 126476727 to 126477299 572 - pseudogene predicted gene 12928
Ago4 4 126489541 to 126533472 43931 - protein coding gene argonaute RISC catalytic subunit 4
Tssr1299 4 126495847 to 126495849 2 + TSS region transcription start site region 1299
Gm12935 4 126521669 to 126522087 418 + pseudogene predicted gene 12935
Gm12934 4 126524330 to 126524672 342 - pseudogene predicted gene 12934
Cpgi14822 4 126532760 to 126534075 1315 CpG island CpG island 14822
Tssr43385 4 126533273 to 126533321 48 - TSS region transcription start site region 43385
Tssr43386 4 126533397 to 126533423 26 - TSS region transcription start site region 43386
Tssr43387 4 126533441 to 126533479 38 - TSS region transcription start site region 43387
Tssr43388 4 126533561 to 126533613 52 - TSS region transcription start site region 43388
Cpgi14823 4 126556714 to 126557538 824 CpG island CpG island 14823
Clspn 4 126556935 to 126593903 36968 + protein coding gene claspin
Tssr39002 4 126556956 to 126556957 1 + TSS region transcription start site region 39002
Tssr39003 4 126556963 to 126556966 3 + TSS region transcription start site region 39003
Tssr39004 4 126556971 to 126556992 21 + TSS region transcription start site region 39004
Tssr39005 4 126556994 to 126557020 26 + TSS region transcription start site region 39005
Tssr39006 4 126557039 to 126557048 9 + TSS region transcription start site region 39006
Mir7119 4 126559860 to 126559918 58 + miRNA gene microRNA 7119
Gm12936 4 126584509 to 126584809 300 - pseudogene predicted gene 12936
Cpgi14824 4 126609511 to 126610191 680 CpG island CpG island 14824
Tssr39007 4 126609819 to 126609896 77 + TSS region transcription start site region 39007
5730409E04Rik 4 126609854 to 126614371 4517 + protein coding gene RIKEN cDNA 5730409E04Rik gene
Tssr39008 4 126609899 to 126609911 12 + TSS region transcription start site region 39008
Tssr39009 4 126609934 to 126609941 7 + TSS region transcription start site region 39009
Tssr39010 4 126609945 to 126609952 7 + TSS region transcription start site region 39010
Tssr39011 4 126613037 to 126613072 35 + TSS region transcription start site region 39011
Gm40250 4 126614367 to 126614787 420 - lncRNA gene predicted gene, 40250
Gm46870 4 126616374 to 126620297 3923 - lncRNA gene predicted gene, 46870
Cpgi14825 4 126619838 to 126620378 540 CpG island CpG island 14825
Tssr39012 4 126665226 to 126665227 1 + TSS region transcription start site region 39012
Gm12933 4 126665254 to 126666125 871 + pseudogene predicted gene 12933
Cpgi14826 4 126677420 to 126677952 532 CpG island CpG island 14826
Psmb2 4 126677634 to 126709715 32081 + protein coding gene proteasome (prosome, macropain) subunit, beta type 2
Tssr39013 4 126677641 to 126677646 5 + TSS region transcription start site region 39013
Tssr39014 4 126677659 to 126677673 14 + TSS region transcription start site region 39014
Tssr39015 4 126677678 to 126677689 11 + TSS region transcription start site region 39015
Tssr39016 4 126677696 to 126677702 6 + TSS region transcription start site region 39016
E330021A06Rik 4 126699535 to 126704028 4493 unclassified gene RIKEN cDNA E330021A06 gene
Tssr39017 4 126706051 to 126706083 32 + TSS region transcription start site region 39017
Tfap2e 4 126716006 to 126736240 20234 - protein coding gene transcription factor AP-2, epsilon
Cpgi14827 4 126732247 to 126732914 667 CpG island CpG island 14827
Cpgi14828 4 126734400 to 126736434 2034 CpG island CpG island 14828
Tssr43389 4 126736236 to 126736245 9 - TSS region transcription start site region 43389
Ncdn 4 126743750 to 126753438 9688 - protein coding gene neurochondrin
Tssr43390 4 126744110 to 126744121 11 - TSS region transcription start site region 43390
Tssr43391 4 126744122 to 126744137 15 - TSS region transcription start site region 43391
Tssr43392 4 126744230 to 126744244 14 - TSS region transcription start site region 43392
Cpgi14829 4 126744862 to 126745124 262 CpG island CpG island 14829
Cpgi14830 4 126749822 to 126750630 808 CpG island CpG island 14830