Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:12531490-13661501

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr36507 4 12561104 to 12561107 3 + TSS region transcription start site region 36507
Tssr40953 4 12562819 to 12562821 2 - TSS region transcription start site region 40953
D4Mit99 4 12569824 to 12569966 142 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 99
Gm37985 4 12597388 to 12671843 74455 + unclassified gene predicted gene, 37985
n-R5s182 4 12812706 to 12812812 106 + rRNA gene nuclear encoded rRNA 5S 182
Tssr40954 4 12865470 to 12865472 2 - TSS region transcription start site region 40954
Cpgi14046 4 12906752 to 12907315 563 CpG island CpG island 14046
Tssr36508 4 12906785 to 12906817 32 + TSS region transcription start site region 36508
Triqk 4 12906837 to 12981485 74648 + protein coding gene triple QxxK/R motif containing
Tssr36509 4 12906840 to 12906881 41 + TSS region transcription start site region 36509
Gm42256 4 12981670 to 13025788 44118 + lncRNA gene predicted gene, 42256
Tssr36510 4 13037963 to 13037965 2 + TSS region transcription start site region 36510
Gm11820 4 13091351 to 13108752 17401 + lincRNA gene predicted gene 11820
Tssr36511 4 13096490 to 13096501 11 + TSS region transcription start site region 36511
Gm46847 4 13108782 to 13117434 8652 + lncRNA gene predicted gene, 46847
Gm26250 4 13266985 to 13267050 65 - miRNA gene predicted gene, 26250
Gm46880 4 13282641 to 13307489 24848 + lncRNA gene predicted gene, 46880
D4Mit100 4 13406590 to 13406771 181 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 100
Gm20032 4 13444763 to 13447593 2830 - pseudogene predicted gene, 20032
Gm11819 4 13444770 to 13445141 371 + pseudogene predicted gene 11819
Gm11826 4 13482755 to 13483192 437 - pseudogene predicted gene 11826
Tssr40955 4 13483227 to 13483237 10 - TSS region transcription start site region 40955
Gm46881 4 13515142 to 13519253 4111 - lncRNA gene predicted gene, 46881
Tssr36512 4 13517176 to 13517184 8 + TSS region transcription start site region 36512
Gm36488 4 13561170 to 13586612 25442 - lncRNA gene predicted gene, 36488
Gm36438 4 13585545 to 13595709 10164 + lncRNA gene predicted gene, 36438
Gm11825 4 13606034 to 13606769 735 + pseudogene predicted gene 11825
0610009K14Rik 4 13609844 to 13668729 58885 unclassified gene RIKEN cDNA 0610009K14 gene
Gm23162 4 13622643 to 13622763 120 - miRNA gene predicted gene, 23162