Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:125123444-125314892

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zc3h12a 4 125118423 to 125127840 9417 - protein coding gene zinc finger CCCH type containing 12A
Tssr43338 4 125124948 to 125124961 13 - TSS region transcription start site region 43338
Tssr38936 4 125125000 to 125125021 21 + TSS region transcription start site region 38936
Tssr43339 4 125125021 to 125125036 15 - TSS region transcription start site region 43339
Tssr38937 4 125125109 to 125125143 34 + TSS region transcription start site region 38937
Tssr43340 4 125127150 to 125127171 21 - TSS region transcription start site region 43340
Cpgi14798 4 125127188 to 125128191 1003 CpG island CpG island 14798
Tssr43341 4 125127286 to 125127307 21 - TSS region transcription start site region 43341
Tssr38938 4 125127451 to 125127463 12 + TSS region transcription start site region 38938
Tssr43342 4 125127817 to 125127843 26 - TSS region transcription start site region 43342
Tssr43343 4 125127848 to 125127891 43 - TSS region transcription start site region 43343
Gm40246 4 125137545 to 125147719 10174 - lncRNA gene predicted gene, 40246
Gm32611 4 125145206 to 125290415 145209 + protein coding gene predicted gene, 32611
Tssr1294 4 125145527 to 125145545 18 + TSS region transcription start site region 1294
Tssr38939 4 125146225 to 125146237 12 + TSS region transcription start site region 38939
Tssr1295 4 125146254 to 125146270 16 + TSS region transcription start site region 1295
Gm40245 4 125150043 to 125187052 37009 + lncRNA gene predicted gene, 40245
Tssr38940 4 125150790 to 125150817 27 + TSS region transcription start site region 38940
Tssr38941 4 125158285 to 125158320 35 + TSS region transcription start site region 38941
Cpgi14799 4 125160441 to 125160699 258 CpG island CpG island 14799
Tssr38942 4 125176521 to 125176541 20 + TSS region transcription start site region 38942
Tssr38943 4 125176551 to 125176561 10 + TSS region transcription start site region 38943
Tssr38944 4 125176571 to 125176598 27 + TSS region transcription start site region 38944
D4Mit125 4 125180353 to 125180498 145 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 125
Gm40244 4 125218444 to 125219892 1448 + lncRNA gene predicted gene, 40244
1700041M05Rik 4 125228597 to 125242052 13455 + lincRNA gene RIKEN cDNA 1700041M05 gene
Cpgi14800 4 125275344 to 125275554 210 CpG island CpG island 14800
D4Mit335 4 125281408 to 125281529 121 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 335
Gm46869 4 125290536 to 125301544 11008 + lncRNA gene predicted gene, 46869
Gm32696 4 125312310 to 125313514 1204 - lncRNA gene predicted gene, 32696