Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:125072460-125172469

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snip1 4 125066672 to 125074042 7370 + protein coding gene Smad nuclear interacting protein 1
Gm18480 4 125075509 to 125076480 971 + pseudogene predicted gene, 18480
Gm12932 4 125082857 to 125084947 2090 - antisense lncRNA gene predicted gene 12932
Cpgi14797 4 125084455 to 125085816 1361 CpG island CpG island 14797
Tssr38933 4 125085111 to 125085122 11 + TSS region transcription start site region 38933
Meaf6 4 125085132 to 125110070 24938 + protein coding gene MYST/Esa1-associated factor 6
Tssr38934 4 125085136 to 125085173 37 + TSS region transcription start site region 38934
Tssr38935 4 125109601 to 125109631 30 + TSS region transcription start site region 38935
Tssr43333 4 125116671 to 125116714 43 - TSS region transcription start site region 43333
Zc3h12a 4 125118423 to 125127840 9417 - protein coding gene zinc finger CCCH type containing 12A
Tssr43334 4 125122460 to 125122469 9 - TSS region transcription start site region 43334
Tssr43335 4 125122505 to 125122532 27 - TSS region transcription start site region 43335
Tssr43336 4 125122539 to 125122563 24 - TSS region transcription start site region 43336
Tssr43337 4 125122577 to 125122588 11 - TSS region transcription start site region 43337
Tssr43338 4 125124948 to 125124961 13 - TSS region transcription start site region 43338
Tssr38936 4 125125000 to 125125021 21 + TSS region transcription start site region 38936
Tssr43339 4 125125021 to 125125036 15 - TSS region transcription start site region 43339
Tssr38937 4 125125109 to 125125143 34 + TSS region transcription start site region 38937
Tssr43340 4 125127150 to 125127171 21 - TSS region transcription start site region 43340
Cpgi14798 4 125127188 to 125128191 1003 CpG island CpG island 14798
Tssr43341 4 125127286 to 125127307 21 - TSS region transcription start site region 43341
Tssr38938 4 125127451 to 125127463 12 + TSS region transcription start site region 38938
Tssr43342 4 125127817 to 125127843 26 - TSS region transcription start site region 43342
Tssr43343 4 125127848 to 125127891 43 - TSS region transcription start site region 43343
Gm40246 4 125137545 to 125147719 10174 - lncRNA gene predicted gene, 40246
Gm32611 4 125145206 to 125290415 145209 + protein coding gene predicted gene, 32611
Tssr1294 4 125145527 to 125145545 18 + TSS region transcription start site region 1294
Tssr38939 4 125146225 to 125146237 12 + TSS region transcription start site region 38939
Tssr1295 4 125146254 to 125146270 16 + TSS region transcription start site region 1295
Gm40245 4 125150043 to 125187052 37009 + lncRNA gene predicted gene, 40245
Tssr38940 4 125150790 to 125150817 27 + TSS region transcription start site region 38940
Tssr38941 4 125158285 to 125158320 35 + TSS region transcription start site region 38941
Cpgi14799 4 125160441 to 125160699 258 CpG island CpG island 14799