Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:125016672-125124042

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38472 4 125017675 to 125021008 3333 + lncRNA gene predicted gene, 38472
Gm12931 4 125019500 to 125019823 323 + pseudogene predicted gene 12931
Cpgi14795 4 125029821 to 125030501 680 CpG island CpG island 14795
Gnl2 4 125029989 to 125055382 25393 + protein coding gene guanine nucleotide binding protein-like 2 (nucleolar)
Tssr38928 4 125030006 to 125030070 64 + TSS region transcription start site region 38928
Tssr38929 4 125030072 to 125030084 12 + TSS region transcription start site region 38929
Tssr38930 4 125052749 to 125052778 29 + TSS region transcription start site region 38930
Dnali1 4 125055339 to 125065657 10318 - protein coding gene dynein, axonemal, light intermediate polypeptide 1
Tssr43330 4 125065603 to 125065672 69 - TSS region transcription start site region 43330
Cpgi14796 4 125066340 to 125067270 930 CpG island CpG island 14796
Tssr43331 4 125066585 to 125066596 11 - TSS region transcription start site region 43331
Tssr43332 4 125066634 to 125066648 14 - TSS region transcription start site region 43332
Snip1 4 125066672 to 125074042 7370 + protein coding gene Smad nuclear interacting protein 1
Tssr38931 4 125066672 to 125066715 43 + TSS region transcription start site region 38931
Tssr38932 4 125066723 to 125066732 9 + TSS region transcription start site region 38932
Gm18480 4 125075509 to 125076480 971 + pseudogene predicted gene, 18480
Gm12932 4 125082857 to 125084947 2090 - antisense lncRNA gene predicted gene 12932
Cpgi14797 4 125084455 to 125085816 1361 CpG island CpG island 14797
Tssr38933 4 125085111 to 125085122 11 + TSS region transcription start site region 38933
Meaf6 4 125085132 to 125110070 24938 + protein coding gene MYST/Esa1-associated factor 6
Tssr38934 4 125085136 to 125085173 37 + TSS region transcription start site region 38934
Tssr38935 4 125109601 to 125109631 30 + TSS region transcription start site region 38935
Tssr43333 4 125116671 to 125116714 43 - TSS region transcription start site region 43333
Zc3h12a 4 125118423 to 125127840 9417 - protein coding gene zinc finger CCCH type containing 12A
Tssr43334 4 125122460 to 125122469 9 - TSS region transcription start site region 43334
Tssr43335 4 125122505 to 125122532 27 - TSS region transcription start site region 43335
Tssr43336 4 125122539 to 125122563 24 - TSS region transcription start site region 43336
Tssr43337 4 125122577 to 125122588 11 - TSS region transcription start site region 43337