Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:124727601-124877610

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sf3a3 4 124714861 to 124732423 17562 + protein coding gene splicing factor 3a, subunit 3
Mir697 4 124731694 to 124731802 108 + miRNA gene microRNA 697
Gm12915 4 124735267 to 124745479 10212 - lncRNA gene predicted gene 12915
Gm24721 4 124735839 to 124735948 109 + miRNA gene predicted gene, 24721
Gm32117 4 124737406 to 124740105 2699 + lncRNA gene predicted gene, 32117
Tssr38904 4 124737648 to 124737659 11 + TSS region transcription start site region 38904
Tssr38905 4 124737694 to 124737706 12 + TSS region transcription start site region 38905
Tssr38906 4 124737742 to 124737759 17 + TSS region transcription start site region 38906
Tssr38907 4 124737798 to 124737806 8 + TSS region transcription start site region 38907
Tssr43319 4 124738776 to 124738805 29 - TSS region transcription start site region 43319
Tssr38908 4 124739021 to 124739055 34 + TSS region transcription start site region 38908
Cpgi14779 4 124741700 to 124741856 156 CpG island CpG island 14779
Tssr38909 4 124741844 to 124741884 40 + TSS region transcription start site region 38909
Inpp5b 4 124741850 to 124801511 59661 + protein coding gene inositol polyphosphate-5-phosphatase B
Tssr38910 4 124742917 to 124742929 12 + TSS region transcription start site region 38910
Tssr38911 4 124742932 to 124742943 11 + TSS region transcription start site region 38911
Mir698 4 124743781 to 124743889 108 + miRNA gene microRNA 698
Cpgi14780 4 124751206 to 124752221 1015 CpG island CpG island 14780
Tssr38912 4 124751595 to 124751604 9 + TSS region transcription start site region 38912
Tssr38913 4 124751608 to 124751649 41 + TSS region transcription start site region 38913
Tssr43320 4 124752163 to 124752193 30 - TSS region transcription start site region 43320
D4Nds2 4 124761871 to 124761969 98 DNA segment DNA segment, Chr 4, Nuffield Department of Surgery 2
Tssr38914 4 124791411 to 124791417 6 + TSS region transcription start site region 38914
Tssr38915 4 124791422 to 124791452 30 + TSS region transcription start site region 38915
Tssr38916 4 124798848 to 124798862 14 + TSS region transcription start site region 38916
Cpgi14781 4 124802025 to 124802762 737 CpG island CpG island 14781
Tssr38917 4 124802543 to 124802588 45 + TSS region transcription start site region 38917
Mtf1 4 124802549 to 124849800 47251 + protein coding gene metal response element binding transcription factor 1
Tssr1293 4 124802601 to 124802610 9 + TSS region transcription start site region 1293
Tssr38918 4 124802811 to 124802818 7 + TSS region transcription start site region 38918
Tssr38919 4 124802833 to 124802844 11 + TSS region transcription start site region 38919
Tssr38920 4 124804551 to 124804561 10 + TSS region transcription start site region 38920
n-R5s192 4 124820821 to 124820939 118 + rRNA gene nuclear encoded rRNA 5S 192
Tssr38921 4 124839957 to 124839961 4 + TSS region transcription start site region 38921
1110065P20Rik 4 124849485 to 124850730 1245 - protein coding gene RIKEN cDNA 1110065P20 gene
Cpgi14782 4 124849697 to 124851821 2124 CpG island CpG island 14782
Tssr43321 4 124850615 to 124850640 25 - TSS region transcription start site region 43321
Tssr43322 4 124850652 to 124850664 12 - TSS region transcription start site region 43322
Tssr43323 4 124850670 to 124850691 21 - TSS region transcription start site region 43323
Tssr38922 4 124850738 to 124850786 48 + TSS region transcription start site region 38922
Yrdc 4 124850759 to 124855242 4483 + protein coding gene yrdC domain containing (E.coli)
Tssr38923 4 124850790 to 124850809 19 + TSS region transcription start site region 38923
Tssr43324 4 124851119 to 124851147 28 - TSS region transcription start site region 43324
Tssr43325 4 124851152 to 124851203 51 - TSS region transcription start site region 43325
Maneal 4 124855239 to 124862171 6932 - protein coding gene mannosidase, endo-alpha-like
Cpgi14783 4 124861220 to 124862747 1527 CpG island CpG island 14783
Tssr43326 4 124862207 to 124862261 54 - TSS region transcription start site region 43326
Tssr43327 4 124862263 to 124862300 37 - TSS region transcription start site region 43327