Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:124459947-124691328

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700057H15Rik 4 124449626 to 124485959 36333 - lincRNA gene RIKEN cDNA 1700057H15 gene
Gm31769 4 124465276 to 124468075 2799 - lncRNA gene predicted gene, 31769
Tssr38879 4 124474436 to 124474441 5 + TSS region transcription start site region 38879
Cpgi14769 4 124511864 to 124512141 277 CpG island CpG island 14769
Gm2164 4 124528924 to 124657169 128245 - antisense lncRNA gene predicted gene 2164
4933407E24Rik 4 124569190 to 124574645 5455 + lincRNA gene RIKEN cDNA 4933407E24 gene
Cpgi14770 4 124574947 to 124576328 1381 CpG island CpG island 14770
3100002H09Rik 4 124609931 to 124610803 872 - unclassified gene RIKEN cDNA 3100002H09 gene
1110007E10Rik 4 124639917 to 124640836 919 unclassified gene RIKEN cDNA 1110007E10 gene
Cpgi14771 4 124656445 to 124659622 3177 CpG island CpG island 14771
Pou3f1 4 124657646 to 124660655 3009 + protein coding gene POU domain, class 3, transcription factor 1
Tssr38880 4 124657651 to 124657656 5 + TSS region transcription start site region 38880
Tssr38881 4 124659548 to 124659561 13 + TSS region transcription start site region 38881
Tssr38882 4 124659673 to 124659689 16 + TSS region transcription start site region 38882
Cpgi14772 4 124659902 to 124660153 251 CpG island CpG island 14772
Gm38545 4 124664294 to 124668677 4383 - lncRNA gene predicted gene, 38545
Tssr43314 4 124668187 to 124668201 14 - TSS region transcription start site region 43314
Cpgi14773 4 124672252 to 124672444 192 CpG island CpG island 14773
Utp11 4 124678232 to 124693612 15380 - protein coding gene UTP11 small subunit processome component