Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
1700057H15Rik | 4 | 36333 | - | lincRNA gene | RIKEN cDNA 1700057H15 gene | |
Tssr43312 | 4 | 25 | - | TSS region | transcription start site region 43312 | |
Tssr43313 | 4 | 1 | - | TSS region | transcription start site region 43313 | |
Gm31830 | 4 | 4997 | + | lncRNA gene | predicted gene, 31830 | |
Gm31769 | 4 | 2799 | - | lncRNA gene | predicted gene, 31769 | |
Tssr38879 | 4 | 5 | + | TSS region | transcription start site region 38879 | |
Cpgi14769 | 4 | 277 | CpG island | CpG island 14769 | ||
Gm2164 | 4 | 128245 | - | antisense lncRNA gene | predicted gene 2164 | |
4933407E24Rik | 4 | 5455 | + | lincRNA gene | RIKEN cDNA 4933407E24 gene | |
Cpgi14770 | 4 | 1381 | CpG island | CpG island 14770 | ||
3100002H09Rik | 4 | 872 | - | unclassified gene | RIKEN cDNA 3100002H09 gene | |
1110007E10Rik | 4 | 919 | unclassified gene | RIKEN cDNA 1110007E10 gene | ||
Cpgi14771 | 4 | 3177 | CpG island | CpG island 14771 | ||
Pou3f1 | 4 | 3009 | + | protein coding gene | POU domain, class 3, transcription factor 1 | |
Tssr38880 | 4 | 5 | + | TSS region | transcription start site region 38880 | |
Tssr38881 | 4 | 13 | + | TSS region | transcription start site region 38881 | |
Tssr38882 | 4 | 16 | + | TSS region | transcription start site region 38882 | |
Cpgi14772 | 4 | 251 | CpG island | CpG island 14772 | ||
Gm38545 | 4 | 4383 | - | lncRNA gene | predicted gene, 38545 | |
Tssr43314 | 4 | 14 | - | TSS region | transcription start site region 43314 | |
Cpgi14773 | 4 | 192 | CpG island | CpG island 14773 | ||
Utp11 | 4 | 15380 | - | protein coding gene | UTP11 small subunit processome component | |
Cpgi14774 | 4 | 787 | CpG island | CpG island 14774 | ||
Tssr43315 | 4 | 18 | - | TSS region | transcription start site region 43315 | |
Tssr43316 | 4 | 38 | - | TSS region | transcription start site region 43316 | |
Tssr38883 | 4 | 7 | + | TSS region | transcription start site region 38883 | |
Tssr38884 | 4 | 19 | + | TSS region | transcription start site region 38884 | |
Tssr38885 | 4 | 11 | + | TSS region | transcription start site region 38885 | |
Tssr38886 | 4 | 44 | + | TSS region | transcription start site region 38886 | |
Tssr38887 | 4 | 13 | + | TSS region | transcription start site region 38887 | |
Tssr38888 | 4 | 10 | + | TSS region | transcription start site region 38888 | |
Tssr38889 | 4 | 35 | + | TSS region | transcription start site region 38889 | |
Gm24480 | 4 | 102 | - | snRNA gene | predicted gene, 24480 | |
Tssr38890 | 4 | 31 | + | TSS region | transcription start site region 38890 | |
Tssr43317 | 4 | 6 | - | TSS region | transcription start site region 43317 | |
Cpgi14775 | 4 | 1007 | CpG island | CpG island 14775 | ||
Tssr38891 | 4 | 13 | + | TSS region | transcription start site region 38891 | |
Tssr38892 | 4 | 27 | + | TSS region | transcription start site region 38892 | |
Tssr38893 | 4 | 28 | + | TSS region | transcription start site region 38893 | |
Fhl3 | 4 | 7910 | + | protein coding gene | four and a half LIM domains 3 | |
Tssr38894 | 4 | 33 | + | TSS region | transcription start site region 38894 | |
Tssr38895 | 4 | 39 | + | TSS region | transcription start site region 38895 | |
Tssr38896 | 4 | 17 | + | TSS region | transcription start site region 38896 | |
Tssr38897 | 4 | 10 | + | TSS region | transcription start site region 38897 | |
Tssr38898 | 4 | 3 | + | TSS region | transcription start site region 38898 | |
Tssr38899 | 4 | 29 | + | TSS region | transcription start site region 38899 | |
Tssr38900 | 4 | 4 | + | TSS region | transcription start site region 38900 | |
Tssr43318 | 4 | 24 | - | TSS region | transcription start site region 43318 | |
Cpgi14776 | 4 | 412 | CpG island | CpG island 14776 | ||
Tssr38901 | 4 | 25 | + | TSS region | transcription start site region 38901 | |
Cpgi14777 | 4 | 158 | CpG island | CpG island 14777 | ||
Cpgi14778 | 4 | 867 | CpG island | CpG island 14778 | ||
Tssr38902 | 4 | 70 | + | TSS region | transcription start site region 38902 | |
Sf3a3 | 4 | 17562 | + | protein coding gene | splicing factor 3a, subunit 3 | |
Gm12917 | 4 | 635 | + | pseudogene | predicted gene 12917 | |
Tssr38903 | 4 | 35 | + | TSS region | transcription start site region 38903 | |
Mir697 | 4 | 108 | + | miRNA gene | microRNA 697 | |
Gm12915 | 4 | 10212 | - | lncRNA gene | predicted gene 12915 | |
Gm24721 | 4 | 109 | + | miRNA gene | predicted gene, 24721 | |
Gm32117 | 4 | 2699 | + | lncRNA gene | predicted gene, 32117 | |
Tssr38904 | 4 | 11 | + | TSS region | transcription start site region 38904 | |
Tssr38905 | 4 | 12 | + | TSS region | transcription start site region 38905 | |
Tssr38906 | 4 | 17 | + | TSS region | transcription start site region 38906 | |
Tssr38907 | 4 | 8 | + | TSS region | transcription start site region 38907 | |
Tssr43319 | 4 | 29 | - | TSS region | transcription start site region 43319 | |
Tssr38908 | 4 | 34 | + | TSS region | transcription start site region 38908 | |
Cpgi14779 | 4 | 156 | CpG island | CpG island 14779 | ||
Tssr38909 | 4 | 40 | + | TSS region | transcription start site region 38909 | |
Inpp5b | 4 | 59661 | + | protein coding gene | inositol polyphosphate-5-phosphatase B | |
Tssr38910 | 4 | 12 | + | TSS region | transcription start site region 38910 | |
Tssr38911 | 4 | 11 | + | TSS region | transcription start site region 38911 | |
Mir698 | 4 | 108 | + | miRNA gene | microRNA 698 | |
Cpgi14780 | 4 | 1015 | CpG island | CpG island 14780 | ||
Tssr38912 | 4 | 9 | + | TSS region | transcription start site region 38912 | |
Tssr38913 | 4 | 41 | + | TSS region | transcription start site region 38913 | |
Tssr43320 | 4 | 30 | - | TSS region | transcription start site region 43320 | |
D4Nds2 | 4 | 98 | DNA segment | DNA segment, Chr 4, Nuffield Department of Surgery 2 | ||
Tssr38914 | 4 | 6 | + | TSS region | transcription start site region 38914 | |
Tssr38915 | 4 | 30 | + | TSS region | transcription start site region 38915 | |
Tssr38916 | 4 | 14 | + | TSS region | transcription start site region 38916 | |
Cpgi14781 | 4 | 737 | CpG island | CpG island 14781 | ||
Tssr38917 | 4 | 45 | + | TSS region | transcription start site region 38917 | |
Mtf1 | 4 | 47251 | + | protein coding gene | metal response element binding transcription factor 1 | |
Tssr1293 | 4 | 9 | + | TSS region | transcription start site region 1293 | |
Tssr38918 | 4 | 7 | + | TSS region | transcription start site region 38918 | |
Tssr38919 | 4 | 11 | + | TSS region | transcription start site region 38919 | |
Tssr38920 | 4 | 10 | + | TSS region | transcription start site region 38920 | |
n-R5s192 | 4 | 118 | + | rRNA gene | nuclear encoded rRNA 5S 192 | |
Tssr38921 | 4 | 4 | + | TSS region | transcription start site region 38921 | |
1110065P20Rik | 4 | 1245 | - | protein coding gene | RIKEN cDNA 1110065P20 gene | |
Cpgi14782 | 4 | 2124 | CpG island | CpG island 14782 | ||
Tssr43321 | 4 | 25 | - | TSS region | transcription start site region 43321 | |
Tssr43322 | 4 | 12 | - | TSS region | transcription start site region 43322 | |
Tssr43323 | 4 | 21 | - | TSS region | transcription start site region 43323 | |
Tssr38922 | 4 | 48 | + | TSS region | transcription start site region 38922 | |
Yrdc | 4 | 4483 | + | protein coding gene | yrdC domain containing (E.coli) | |
Tssr38923 | 4 | 19 | + | TSS region | transcription start site region 38923 | |
Tssr43324 | 4 | 28 | - | TSS region | transcription start site region 43324 | |
Tssr43325 | 4 | 51 | - | TSS region | transcription start site region 43325 | |
Maneal | 4 | 6932 | - | protein coding gene | mannosidase, endo-alpha-like | |
Cpgi14783 | 4 | 1527 | CpG island | CpG island 14783 | ||
Tssr43326 | 4 | 54 | - | TSS region | transcription start site region 43326 | |
Tssr43327 | 4 | 37 | - | TSS region | transcription start site region 43327 | |
Cpgi14784 | 4 | 698 | CpG island | CpG island 14784 | ||
Epha10 | 4 | 36015 | + | protein coding gene | Eph receptor A10 | |
Tssr38924 | 4 | 51 | + | TSS region | transcription start site region 38924 | |
Cpgi14785 | 4 | 566 | CpG island | CpG island 14785 | ||
Cpgi14786 | 4 | 810 | CpG island | CpG island 14786 | ||
1700125G02Rik | 4 | 3894 | - | antisense lncRNA gene | RIKEN cDNA 1700125G02 gene | |
Cpgi14787 | 4 | 1349 | CpG island | CpG island 14787 | ||
D4Mit147 | 4 | 192 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 147 | ||
Arvm2 | 4 | 192 | QTL | autoimmune renal vasculitis 2 | ||
Cpgi14788 | 4 | 269 | CpG island | CpG island 14788 | ||
Cpgi14789 | 4 | 340 | CpG island | CpG island 14789 | ||
D4Mit279 | 4 | 109 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 279 | ||
Cpgi14790 | 4 | 221 | CpG island | CpG island 14790 | ||
Cdca8 | 4 | 18452 | - | protein coding gene | cell division cycle associated 8 | |
Cpgi14791 | 4 | 959 | CpG island | CpG island 14791 | ||
Tssr43328 | 4 | 11 | - | TSS region | transcription start site region 43328 | |
Tssr43329 | 4 | 72 | - | TSS region | transcription start site region 43329 | |
Tssr38925 | 4 | 32 | + | TSS region | transcription start site region 38925 | |
9930104L06Rik | 4 | 7608 | + | protein coding gene | RIKEN cDNA 9930104L06 gene | |
Tssr38926 | 4 | 31 | + | TSS region | transcription start site region 38926 | |
Gm40243 | 4 | 17164 | + | lncRNA gene | predicted gene, 40243 | |
Gm12930 | 4 | 29362 | - | antisense lncRNA gene | predicted gene 12930 | |
Gm32371 | 4 | 6970 | - | lncRNA gene | predicted gene, 32371 | |
Cpgi14792 | 4 | 1796 | CpG island | CpG island 14792 | ||
Rspo1 | 4 | 22669 | + | protein coding gene | R-spondin 1 | |
Tssr38927 | 4 | 33 | + | TSS region | transcription start site region 38927 | |
Cpgi14793 | 4 | 419 | CpG island | CpG island 14793 | ||
Cpgi14794 | 4 | 293 | CpG island | CpG island 14794 | ||
Gm38472 | 4 | 3333 | + | lncRNA gene | predicted gene, 38472 | |
Gm12931 | 4 | 323 | + | pseudogene | predicted gene 12931 | |
Cpgi14795 | 4 | 680 | CpG island | CpG island 14795 | ||
Gnl2 | 4 | 25393 | + | protein coding gene | guanine nucleotide binding protein-like 2 (nucleolar) | |
Tssr38928 | 4 | 64 | + | TSS region | transcription start site region 38928 | |
Tssr38929 | 4 | 12 | + | TSS region | transcription start site region 38929 | |
Tssr38930 | 4 | 29 | + | TSS region | transcription start site region 38930 | |
Dnali1 | 4 | 10318 | - | protein coding gene | dynein, axonemal, light intermediate polypeptide 1 | |
Tssr43330 | 4 | 69 | - | TSS region | transcription start site region 43330 | |
Cpgi14796 | 4 | 930 | CpG island | CpG island 14796 | ||
Tssr43331 | 4 | 11 | - | TSS region | transcription start site region 43331 | |
Tssr43332 | 4 | 14 | - | TSS region | transcription start site region 43332 | |
Tssr38931 | 4 | 43 | + | TSS region | transcription start site region 38931 | |
Snip1 | 4 | 7370 | + | protein coding gene | Smad nuclear interacting protein 1 | |
Tssr38932 | 4 | 9 | + | TSS region | transcription start site region 38932 | |
Gm18480 | 4 | 971 | + | pseudogene | predicted gene, 18480 | |
Gm12932 | 4 | 2090 | - | antisense lncRNA gene | predicted gene 12932 | |
Cpgi14797 | 4 | 1361 | CpG island | CpG island 14797 | ||
Tssr38933 | 4 | 11 | + | TSS region | transcription start site region 38933 | |
Meaf6 | 4 | 24938 | + | protein coding gene | MYST/Esa1-associated factor 6 | |
Tssr38934 | 4 | 37 | + | TSS region | transcription start site region 38934 | |
Tssr38935 | 4 | 30 | + | TSS region | transcription start site region 38935 | |
Tssr43333 | 4 | 43 | - | TSS region | transcription start site region 43333 | |
Zc3h12a | 4 | 9417 | - | protein coding gene | zinc finger CCCH type containing 12A | |
Tssr43334 | 4 | 9 | - | TSS region | transcription start site region 43334 | |
Tssr43335 | 4 | 27 | - | TSS region | transcription start site region 43335 | |
Tssr43336 | 4 | 24 | - | TSS region | transcription start site region 43336 | |
Tssr43337 | 4 | 11 | - | TSS region | transcription start site region 43337 | |
Tssr43338 | 4 | 13 | - | TSS region | transcription start site region 43338 | |
Tssr38936 | 4 | 21 | + | TSS region | transcription start site region 38936 | |
Tssr43339 | 4 | 15 | - | TSS region | transcription start site region 43339 | |
Tssr38937 | 4 | 34 | + | TSS region | transcription start site region 38937 | |
Tssr43340 | 4 | 21 | - | TSS region | transcription start site region 43340 | |
Cpgi14798 | 4 | 1003 | CpG island | CpG island 14798 | ||
Tssr43341 | 4 | 21 | - | TSS region | transcription start site region 43341 | |
Tssr38938 | 4 | 12 | + | TSS region | transcription start site region 38938 | |
Tssr43342 | 4 | 26 | - | TSS region | transcription start site region 43342 | |
Tssr43343 | 4 | 43 | - | TSS region | transcription start site region 43343 | |
Gm40246 | 4 | 10174 | - | lncRNA gene | predicted gene, 40246 | |
Gm32611 | 4 | 145209 | + | protein coding gene | predicted gene, 32611 | |
Tssr1294 | 4 | 18 | + | TSS region | transcription start site region 1294 | |
Tssr38939 | 4 | 12 | + | TSS region | transcription start site region 38939 | |
Tssr1295 | 4 | 16 | + | TSS region | transcription start site region 1295 | |
Gm40245 | 4 | 37009 | + | lncRNA gene | predicted gene, 40245 | |
Tssr38940 | 4 | 27 | + | TSS region | transcription start site region 38940 | |
Tssr38941 | 4 | 35 | + | TSS region | transcription start site region 38941 | |
Cpgi14799 | 4 | 258 | CpG island | CpG island 14799 | ||
Tssr38942 | 4 | 20 | + | TSS region | transcription start site region 38942 | |
Tssr38943 | 4 | 10 | + | TSS region | transcription start site region 38943 | |
Tssr38944 | 4 | 27 | + | TSS region | transcription start site region 38944 | |
D4Mit125 | 4 | 145 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 125 | ||
Gm40244 | 4 | 1448 | + | lncRNA gene | predicted gene, 40244 | |
1700041M05Rik | 4 | 13455 | + | lincRNA gene | RIKEN cDNA 1700041M05 gene | |
Cpgi14800 | 4 | 210 | CpG island | CpG island 14800 | ||
D4Mit335 | 4 | 121 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 335 | ||
Gm46869 | 4 | 11008 | + | lncRNA gene | predicted gene, 46869 | |
Gm32696 | 4 | 1204 | - | lncRNA gene | predicted gene, 32696 | |
D4Mit338 | 4 | 100 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 338 | ||
D4Dcr23 | 4 | 95 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 23 | ||
Tssr43344 | 4 | 10 | - | TSS region | transcription start site region 43344 | |
Tssr43345 | 4 | 12 | - | TSS region | transcription start site region 43345 | |
Tssr43346 | 4 | 10 | - | TSS region | transcription start site region 43346 | |
Gm40247 | 4 | 12814 | + | lncRNA gene | predicted gene, 40247 |