Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:123887132-124027472

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr43304 4 123892803 to 123892807 4 - TSS region transcription start site region 43304
Tssr43305 4 123896592 to 123896604 12 - TSS region transcription start site region 43305
Tssr43306 4 123896616 to 123896625 9 - TSS region transcription start site region 43306
Gm40240 4 123897862 to 123901214 3352 - lncRNA gene predicted gene, 40240
Gm26606 4 123898633 to 123904842 6209 - lincRNA gene predicted gene, 26606
D130007C19Rik 4 123902129 to 123903634 1505 - pseudogene RIKEN cDNA D130007C19 gene
Gm12903 4 123902422 to 123902965 543 + pseudogene predicted gene 12903
Cpgi14759 4 123904625 to 123905576 951 CpG island CpG island 14759
Tssr43307 4 123904826 to 123904844 18 - TSS region transcription start site region 43307
Tssr38870 4 123904836 to 123904851 15 + TSS region transcription start site region 38870
Tssr38871 4 123904907 to 123904916 9 + TSS region transcription start site region 38871
Tssr38872 4 123904975 to 123904984 9 + TSS region transcription start site region 38872
Tssr38873 4 123904989 to 123905051 62 + TSS region transcription start site region 38873
Mycbp 4 123905013 to 123912250 7237 + protein coding gene MYC binding protein
Gm12905 4 123905062 to 123917269 12207 - antisense lncRNA gene predicted gene 12905
Tssr38874 4 123905130 to 123905150 20 + TSS region transcription start site region 38874
Tssr43308 4 123907440 to 123907444 4 - TSS region transcription start site region 43308
Cpgi14760 4 123916968 to 123918237 1269 CpG island CpG island 14760
Tssr43309 4 123917226 to 123917318 92 - TSS region transcription start site region 43309
Tssr38875 4 123917420 to 123917510 90 + TSS region transcription start site region 38875
Rragc 4 123917446 to 123936997 19551 + protein coding gene Ras-related GTP binding C
4930535I16Rik 4 123917504 to 123918022 518 - protein coding gene RIKEN cDNA 4930535I16 gene
Tssr38876 4 123921502 to 123921508 6 + TSS region transcription start site region 38876
Gm12902 4 123926234 to 123926555 321 + pseudogene predicted gene 12902
Tssr38877 4 123928298 to 123928319 21 + TSS region transcription start site region 38877
Tssr1290 4 123947977 to 123947985 8 + TSS region transcription start site region 1290
Cpgi14761 4 123957132 to 123957472 340 CpG island CpG island 14761
Cpgi14762 4 123972356 to 123972737 381 CpG island CpG island 14762
Tssr1291 4 123983388 to 123983397 9 + TSS region transcription start site region 1291
Cpgi14763 4 123990711 to 123991282 571 CpG island CpG island 14763