MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:123747874-123869904

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Akirin1	4	123735195 to 123750299	15104	-	protein coding gene	akirin 1
Cpgi14758	4	123749500 to 123750619	1119		CpG island	CpG island 14758
Tssr43297	4	123750230 to 123750235	5	-	TSS region	transcription start site region 43297
Tssr43298	4	123750236 to 123750293	57	-	TSS region	transcription start site region 43298
Tssr43299	4	123750298 to 123750309	11	-	TSS region	transcription start site region 43299
Tssr38866	4	123787843 to 123787855	12	+	TSS region	transcription start site region 38866
Tssr38867	4	123787857 to 123787886	29	+	TSS region	transcription start site region 38867
Rhbdl2	4	123787874 to 123829904	42030	+	protein coding gene	rhomboid like 2
Gm12904	4	123838098 to 123839242	1144	+	pseudogene	predicted gene 12904
Tssr43300	4	123841967 to 123841980	13	-	TSS region	transcription start site region 43300
Tssr43301	4	123841987 to 123841995	8	-	TSS region	transcription start site region 43301
Tssr43302	4	123842019 to 123842026	7	-	TSS region	transcription start site region 43302
Gm46860	4	123845999 to 123849513	3514	-	pseudogene	predicted gene, 46860
1700121C08Rik	4	123852457 to 123859409	6952	-	antisense lncRNA gene	RIKEN cDNA 1700121C08 gene
Tssr38868	4	123858342 to 123858353	11	+	TSS region	transcription start site region 38868
Tssr43303	4	123859520 to 123859558	38	-	TSS region	transcription start site region 43303
Tssr38869	4	123859651 to 123859700	49	+	TSS region	transcription start site region 38869
4933427I04Rik	4	123859679 to 123863165	3486	+	protein coding gene	Riken cDNA 4933427I04 gene