MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:122631463-122834532

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12875	4	122640346 to 122648326	7980	-	pseudogene	predicted gene 12875
Gm12876	4	122660923 to 122677278	16355	-	pseudogene	predicted gene 12876
Tssr38821	4	122673787 to 122673797	10	+	TSS region	transcription start site region 38821
Tssr1287	4	122673802 to 122673806	4	+	TSS region	transcription start site region 1287
Tssr38822	4	122673821 to 122673832	11	+	TSS region	transcription start site region 38822
Tssr43201	4	122688958 to 122688963	5	-	TSS region	transcription start site region 43201
Tssr38823	4	122689253 to 122689258	5	+	TSS region	transcription start site region 38823
Tssr38824	4	122689262 to 122689283	21	+	TSS region	transcription start site region 38824
9530002B09Rik	4	122689275 to 122705129	15854	+	protein coding gene	RIKEN cDNA 9530002B09 gene
Tssr38825	4	122689291 to 122689320	29	+	TSS region	transcription start site region 38825
Tssr38826	4	122689330 to 122689369	39	+	TSS region	transcription start site region 38826
Tssr38827	4	122689383 to 122689391	8	+	TSS region	transcription start site region 38827
Tssr1288	4	122689397 to 122689406	9	+	TSS region	transcription start site region 1288
Tssr38828	4	122689432 to 122689437	5	+	TSS region	transcription start site region 38828
Gm30548	4	122726463 to 122739532	13069	-	lncRNA gene	predicted gene, 30548
Gm12872	4	122730284 to 122734733	4449	-	pseudogene	predicted gene 12872
Gm12873	4	122778154 to 122793749	15595	-	pseudogene	predicted gene 12873
Tssr43202	4	122793766 to 122793784	18	-	TSS region	transcription start site region 43202