Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:122200186-122859153

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12897 4 122187748 to 122206656 18908 + pseudogene predicted gene 12897
Gm12893 4 122234979 to 122235917 938 + pseudogene predicted gene 12893
Gm10573 4 122300878 to 122313819 12941 - protein coding gene predicted gene 10573
Gm12895 4 122455210 to 122455435 225 + pseudogene predicted gene 12895
Tssr43200 4 122455301 to 122455350 49 - TSS region transcription start site region 43200
Gm30405 4 122520186 to 122539153 18967 + lncRNA gene predicted gene, 30405
Gm12877 4 122582700 to 122604894 22194 - pseudogene predicted gene 12877
Gm12874 4 122592984 to 122594068 1084 + pseudogene predicted gene 12874
Gm12875 4 122640346 to 122648326 7980 - pseudogene predicted gene 12875
Gm12876 4 122660923 to 122677278 16355 - pseudogene predicted gene 12876
Tssr38821 4 122673787 to 122673797 10 + TSS region transcription start site region 38821
Tssr1287 4 122673802 to 122673806 4 + TSS region transcription start site region 1287
Tssr38822 4 122673821 to 122673832 11 + TSS region transcription start site region 38822
Tssr43201 4 122688958 to 122688963 5 - TSS region transcription start site region 43201
Tssr38823 4 122689253 to 122689258 5 + TSS region transcription start site region 38823
Tssr38824 4 122689262 to 122689283 21 + TSS region transcription start site region 38824
9530002B09Rik 4 122689275 to 122705129 15854 + protein coding gene RIKEN cDNA 9530002B09 gene
Tssr38825 4 122689291 to 122689320 29 + TSS region transcription start site region 38825
Tssr38826 4 122689330 to 122689369 39 + TSS region transcription start site region 38826
Tssr38827 4 122689383 to 122689391 8 + TSS region transcription start site region 38827
Tssr1288 4 122689397 to 122689406 9 + TSS region transcription start site region 1288
Tssr38828 4 122689432 to 122689437 5 + TSS region transcription start site region 38828
Gm30548 4 122726463 to 122739532 13069 - lncRNA gene predicted gene, 30548
Gm12872 4 122730284 to 122734733 4449 - pseudogene predicted gene 12872
Gm12873 4 122778154 to 122793749 15595 - pseudogene predicted gene 12873
Tssr43202 4 122793766 to 122793784 18 - TSS region transcription start site region 43202
Cpgi14736 4 122835925 to 122836495 570 CpG island CpG island 14736
Tssr38829 4 122836050 to 122836067 17 + TSS region transcription start site region 38829
Tssr38830 4 122836236 to 122836259 23 + TSS region transcription start site region 38830
Ppt1 4 122836242 to 122859175 22933 + protein coding gene palmitoyl-protein thioesterase 1
Tssr38831 4 122857958 to 122857996 38 + TSS region transcription start site region 38831
Tssr38832 4 122858567 to 122858570 3 + TSS region transcription start site region 38832
Cap1 4 122859047 to 122886056 27009 - protein coding gene CAP, adenylate cyclase-associated protein 1 (yeast)