Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:120988190-121208250

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smap2 4 120968317 to 121017247 48930 - protein coding gene small ArfGAP 2
Tssr43180 4 121008709 to 121008725 16 - TSS region transcription start site region 43180
Tssr43181 4 121014619 to 121014640 21 - TSS region transcription start site region 43181
Tssr38811 4 121016070 to 121016102 32 + TSS region transcription start site region 38811
Cpgi14728 4 121016389 to 121017405 1016 CpG island CpG island 14728
Tssr43182 4 121016980 to 121017008 28 - TSS region transcription start site region 43182
Tssr43183 4 121017147 to 121017199 52 - TSS region transcription start site region 43183
Tssr43184 4 121017201 to 121017261 60 - TSS region transcription start site region 43184
Cpgi14729 4 121017882 to 121018239 357 CpG island CpG island 14729
Cpgi14730 4 121039522 to 121040402 880 CpG island CpG island 14730
Tssr38812 4 121039556 to 121039680 124 + TSS region transcription start site region 38812
Col9a2 4 121039566 to 121055325 15759 + protein coding gene collagen, type IX, alpha 2
Tssr38813 4 121039681 to 121039697 16 + TSS region transcription start site region 38813
Tssr38814 4 121039701 to 121039712 11 + TSS region transcription start site region 38814
Tssr38815 4 121041759 to 121041771 12 + TSS region transcription start site region 38815
Cpgi14731 4 121052946 to 121053154 208 CpG island CpG island 14731
Tssr38816 4 121053030 to 121053043 13 + TSS region transcription start site region 38816
Tssr1283 4 121055313 to 121055324 11 - TSS region transcription start site region 1283
Zmpste24 4 121059237 to 121098241 39004 - protein coding gene zinc metallopeptidase, STE24
Gm26186 4 121075798 to 121075922 124 - snoRNA gene predicted gene, 26186
Tssr43185 4 121078740 to 121078751 11 - TSS region transcription start site region 43185
Gm23540 4 121083986 to 121084149 163 - snRNA gene predicted gene, 23540
Tssr1284 4 121084144 to 121084147 3 - TSS region transcription start site region 1284
Tssr38817 4 121094002 to 121094008 6 + TSS region transcription start site region 38817
Cpgi14732 4 121097676 to 121098392 716 CpG island CpG island 14732
Tssr43186 4 121098022 to 121098089 67 - TSS region transcription start site region 43186
Tssr43187 4 121098140 to 121098151 11 - TSS region transcription start site region 43187
Tssr43188 4 121098157 to 121098171 14 - TSS region transcription start site region 43188
Tssr43189 4 121098190 to 121098250 60 - TSS region transcription start site region 43189
Tssr43190 4 121098251 to 121098262 11 - TSS region transcription start site region 43190
Tmco2 4 121105651 to 121109226 3575 - protein coding gene transmembrane and coiled-coil domains 2
Tssr43191 4 121109184 to 121109193 9 - TSS region transcription start site region 43191
Tssr43192 4 121109199 to 121109231 32 - TSS region transcription start site region 43192
Tssr43193 4 121109239 to 121109253 14 - TSS region transcription start site region 43193
Gm12882 4 121114789 to 121115305 516 - pseudogene predicted gene 12882
Tssr43194 4 121115343 to 121115344 1 - TSS region transcription start site region 43194
Gm12881 4 121120874 to 121121296 422 - pseudogene predicted gene 12881
Gm12879 4 121130118 to 121131299 1181 + pseudogene predicted gene 12879
Tssr38818 4 121134654 to 121134659 5 + TSS region transcription start site region 38818
Gm22982 4 121134657 to 121134975 318 + unclassified non-coding RNA gene predicted gene, 22982
Rlf 4 121145373 to 121215084 69711 - protein coding gene rearranged L-myc fusion sequence
Tssr43195 4 121196488 to 121196492 4 - TSS region transcription start site region 43195