Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Dob1 | 4 | 21516014 | QTL | dietary obesity 1 | ||
Mmtg2 | 4 | 7747605 | QTL | modifier of mammary tumor growth 2 | ||
Iva1 | 4 | 3651232 | QTL | isovaleric acid smelling 1 | ||
Opfaq6 | 4 | 2301502 | QTL | open field activity QTL 6 | ||
Gm45579 | 4 | 3918 | - | lincRNA gene | predicted gene 45579 | |
Cpgi14716 | 4 | 912 | CpG island | CpG island 14716 | ||
Gm29891 | 4 | 3638 | + | lncRNA gene | predicted gene, 29891 | |
D4Dcr19 | 4 | 95 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 19 | ||
Cpgi14717 | 4 | 1232 | CpG island | CpG island 14717 | ||
Tssr38800 | 4 | 17 | + | TSS region | transcription start site region 38800 | |
Cited4 | 4 | 1248 | + | protein coding gene | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 | |
Tssr38801 | 4 | 9 | + | TSS region | transcription start site region 38801 | |
Tssr38802 | 4 | 8 | + | TSS region | transcription start site region 38802 | |
Tssr38803 | 4 | 13 | + | TSS region | transcription start site region 38803 | |
Kcnq4 | 4 | 51357 | - | protein coding gene | potassium voltage-gated channel, subfamily Q, member 4 | |
Cpgi14718 | 4 | 403 | CpG island | CpG island 14718 | ||
Cpgi14719 | 4 | 599 | CpG island | CpG island 14719 | ||
Cpgi14720 | 4 | 399 | CpG island | CpG island 14720 | ||
Cpgi14721 | 4 | 1803 | CpG island | CpG island 14721 | ||
Tssr43154 | 4 | 60 | - | TSS region | transcription start site region 43154 | |
Tssr43155 | 4 | 9 | - | TSS region | transcription start site region 43155 | |
Cpgi14722 | 4 | 376 | CpG island | CpG island 14722 | ||
Nfyc | 4 | 74134 | - | protein coding gene | nuclear transcription factor-Y gamma | |
Mirc39 | 4 | 3163 | complex/cluster/region | micro RNA cluster 39, including Mir30c-1 through Mir31e | ||
Mir30c-1 | 4 | 88 | - | miRNA gene | microRNA 30c-1 | |
Mir30e | 4 | 91 | - | miRNA gene | microRNA 30e | |
Mir30f | 4 | 91 | + | miRNA gene | microRNA 30f | |
Tssr43156 | 4 | 4 | - | TSS region | transcription start site region 43156 | |
Tssr43157 | 4 | 4 | - | TSS region | transcription start site region 43157 | |
Tssr43158 | 4 | 6 | - | TSS region | transcription start site region 43158 | |
Tssr43159 | 4 | 58 | - | TSS region | transcription start site region 43159 | |
Cpgi14723 | 4 | 1294 | CpG island | CpG island 14723 | ||
Tssr43160 | 4 | 47 | - | TSS region | transcription start site region 43160 | |
Tssr38804 | 4 | 51 | + | TSS region | transcription start site region 38804 | |
Tssr43161 | 4 | 15 | - | TSS region | transcription start site region 43161 | |
Tssr43162 | 4 | 45 | - | TSS region | transcription start site region 43162 | |
Gm23936 | 4 | 109 | + | miRNA gene | predicted gene, 23936 | |
D4Dcr20 | 4 | 95 | DNA segment | DNA Segment, Chr 4, Derry C. Roopenian 20 | ||
Cpgi14724 | 4 | 861 | CpG island | CpG island 14724 | ||
Tssr38805 | 4 | 5 | + | TSS region | transcription start site region 38805 | |
Tssr38806 | 4 | 57 | + | TSS region | transcription start site region 38806 | |
Rims3 | 4 | 41763 | + | protein coding gene | regulating synaptic membrane exocytosis 3 | |
Tssr38807 | 4 | 20 | + | TSS region | transcription start site region 38807 | |
D4Mit156 | 4 | 149 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 156 | ||
Gm12871 | 4 | 437 | + | pseudogene | predicted gene 12871 | |
Gm24678 | 4 | 103 | + | snRNA gene | predicted gene, 24678 | |
Exo5 | 4 | 3803 | - | protein coding gene | exonuclease 5 | |
Cpgi14725 | 4 | 475 | CpG island | CpG island 14725 | ||
Tssr43163 | 4 | 11 | - | TSS region | transcription start site region 43163 | |
Tssr43164 | 4 | 82 | - | TSS region | transcription start site region 43164 | |
Tssr38808 | 4 | 68 | + | TSS region | transcription start site region 38808 | |
Zfp69 | 4 | 21562 | - | protein coding gene | zinc finger protein 69 | |
Cpgi14726 | 4 | 551 | CpG island | CpG island 14726 | ||
Cpgi14727 | 4 | 870 | CpG island | CpG island 14727 | ||
Tssr43165 | 4 | 33 | - | TSS region | transcription start site region 43165 | |
Tssr38809 | 4 | 23 | + | TSS region | transcription start site region 38809 | |
Tssr43166 | 4 | 11 | - | TSS region | transcription start site region 43166 | |
Smap2 | 4 | 48930 | - | protein coding gene | small ArfGAP 2 | |
Tssr43167 | 4 | 32 | - | TSS region | transcription start site region 43167 | |
Tssr43168 | 4 | 19 | - | TSS region | transcription start site region 43168 | |
Tssr38810 | 4 | 26 | + | TSS region | transcription start site region 38810 | |
Tssr43169 | 4 | 13 | - | TSS region | transcription start site region 43169 | |
Mir7015 | 4 | 63 | - | miRNA gene | microRNA 7015 | |
Tssr43170 | 4 | 17 | - | TSS region | transcription start site region 43170 | |
Tssr43171 | 4 | 9 | - | TSS region | transcription start site region 43171 | |
Tssr43172 | 4 | 26 | - | TSS region | transcription start site region 43172 | |
Tssr43173 | 4 | 23 | - | TSS region | transcription start site region 43173 | |
Tssr43174 | 4 | 8 | - | TSS region | transcription start site region 43174 | |
Tssr43175 | 4 | 65 | - | TSS region | transcription start site region 43175 | |
Tssr43176 | 4 | 12 | - | TSS region | transcription start site region 43176 | |
Tssr43177 | 4 | 13 | - | TSS region | transcription start site region 43177 | |
Tssr43178 | 4 | 13 | - | TSS region | transcription start site region 43178 | |
Tssr43179 | 4 | 15 | - | TSS region | transcription start site region 43179 | |
Tssr43180 | 4 | 16 | - | TSS region | transcription start site region 43180 | |
Tssr43181 | 4 | 21 | - | TSS region | transcription start site region 43181 | |
Tssr38811 | 4 | 32 | + | TSS region | transcription start site region 38811 | |
Cpgi14728 | 4 | 1016 | CpG island | CpG island 14728 | ||
Tssr43182 | 4 | 28 | - | TSS region | transcription start site region 43182 | |
Tssr43183 | 4 | 52 | - | TSS region | transcription start site region 43183 | |
Tssr43184 | 4 | 60 | - | TSS region | transcription start site region 43184 | |
Cpgi14729 | 4 | 357 | CpG island | CpG island 14729 | ||
Cpgi14730 | 4 | 880 | CpG island | CpG island 14730 | ||
Tssr38812 | 4 | 124 | + | TSS region | transcription start site region 38812 | |
Col9a2 | 4 | 15759 | + | protein coding gene | collagen, type IX, alpha 2 | |
Tssr38813 | 4 | 16 | + | TSS region | transcription start site region 38813 | |
Tssr38814 | 4 | 11 | + | TSS region | transcription start site region 38814 | |
Tssr38815 | 4 | 12 | + | TSS region | transcription start site region 38815 | |
Cpgi14731 | 4 | 208 | CpG island | CpG island 14731 | ||
Tssr38816 | 4 | 13 | + | TSS region | transcription start site region 38816 | |
Tssr1283 | 4 | 11 | - | TSS region | transcription start site region 1283 | |
Zmpste24 | 4 | 39004 | - | protein coding gene | zinc metallopeptidase, STE24 | |
Gm26186 | 4 | 124 | - | snoRNA gene | predicted gene, 26186 | |
Tssr43185 | 4 | 11 | - | TSS region | transcription start site region 43185 | |
Gm23540 | 4 | 163 | - | snRNA gene | predicted gene, 23540 | |
Tssr1284 | 4 | 3 | - | TSS region | transcription start site region 1284 | |
Tssr38817 | 4 | 6 | + | TSS region | transcription start site region 38817 | |
Cpgi14732 | 4 | 716 | CpG island | CpG island 14732 | ||
Tssr43186 | 4 | 67 | - | TSS region | transcription start site region 43186 | |
Tssr43187 | 4 | 11 | - | TSS region | transcription start site region 43187 | |
Tssr43188 | 4 | 14 | - | TSS region | transcription start site region 43188 | |
Tssr43189 | 4 | 60 | - | TSS region | transcription start site region 43189 | |
Tssr43190 | 4 | 11 | - | TSS region | transcription start site region 43190 | |
Tmco2 | 4 | 3575 | - | protein coding gene | transmembrane and coiled-coil domains 2 | |
Tssr43191 | 4 | 9 | - | TSS region | transcription start site region 43191 | |
Tssr43192 | 4 | 32 | - | TSS region | transcription start site region 43192 | |
Tssr43193 | 4 | 14 | - | TSS region | transcription start site region 43193 | |
Gm12882 | 4 | 516 | - | pseudogene | predicted gene 12882 | |
Tssr43194 | 4 | 1 | - | TSS region | transcription start site region 43194 | |
Gm12881 | 4 | 422 | - | pseudogene | predicted gene 12881 | |
Gm12879 | 4 | 1181 | + | pseudogene | predicted gene 12879 | |
Tssr38818 | 4 | 5 | + | TSS region | transcription start site region 38818 | |
Gm22982 | 4 | 318 | + | unclassified non-coding RNA gene | predicted gene, 22982 | |
Rlf | 4 | 69711 | - | protein coding gene | rearranged L-myc fusion sequence | |
Tssr43195 | 4 | 4 | - | TSS region | transcription start site region 43195 | |
Cpgi14733 | 4 | 891 | CpG island | CpG island 14733 | ||
Tssr43196 | 4 | 43 | - | TSS region | transcription start site region 43196 | |
Tssr38819 | 4 | 11 | + | TSS region | transcription start site region 38819 | |
Gm12890 | 4 | 372 | - | pseudogene | predicted gene 12890 | |
Gm30102 | 4 | 8293 | + | lncRNA gene | predicted gene, 30102 | |
Gm40239 | 4 | 5818 | - | lncRNA gene | predicted gene, 40239 | |
Gm12888 | 4 | 8601 | - | protein coding gene | predicted gene 12888 | |
Tssr43197 | 4 | 16 | - | TSS region | transcription start site region 43197 | |
Gm12889 | 4 | 240 | + | pseudogene | predicted gene 12889 | |
Gm12885 | 4 | 327 | + | pseudogene | predicted gene 12885 | |
Gm12884 | 4 | 324 | + | pseudogene | predicted gene 12884 | |
Gm12883 | 4 | 3565 | + | pseudogene | predicted gene 12883 | |
Gm8359 | 4 | 2354 | - | protein coding gene | predicted gene 8359 | |
Tssr43198 | 4 | 9 | - | TSS region | transcription start site region 43198 | |
Gm12886 | 4 | 8364 | - | protein coding gene | predicted gene 12886 | |
Gm12880 | 4 | 2640 | - | pseudogene | predicted gene 12880 | |
Gm26162 | 4 | 131 | + | snoRNA gene | predicted gene, 26162 | |
Tssr43199 | 4 | 15 | - | TSS region | transcription start site region 43199 | |
Tssr1285 | 4 | 2 | + | TSS region | transcription start site region 1285 | |
Gm12887 | 4 | 7832 | - | protein coding gene | predicted gene 12887 | |
Gm12878 | 4 | 331 | + | pseudogene | predicted gene 12878 | |
Gm21404 | 4 | 12943 | - | protein coding gene | predicted gene, 21404 | |
Cpgi14734 | 4 | 741 | CpG island | CpG island 14734 | ||
Tssr38820 | 4 | 32 | + | TSS region | transcription start site region 38820 | |
Gm12892 | 4 | 1145 | + | pseudogene | predicted gene 12892 | |
Tssr1286 | 4 | 8 | - | TSS region | transcription start site region 1286 | |
Cpgi14735 | 4 | 412 | CpG island | CpG island 14735 | ||
D4Mit201.1 | 4 | 111 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 201.1 | ||
D4Mit201 | 4 | 157 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 201 | ||
Gm12896 | 4 | 225 | + | pseudogene | predicted gene 12896 | |
Gm12897 | 4 | 18908 | + | pseudogene | predicted gene 12897 | |
Gm12893 | 4 | 938 | + | pseudogene | predicted gene 12893 | |
Gm10573 | 4 | 12941 | - | protein coding gene | predicted gene 10573 | |
Gm12895 | 4 | 225 | + | pseudogene | predicted gene 12895 | |
Tssr43200 | 4 | 49 | - | TSS region | transcription start site region 43200 | |
Gm30405 | 4 | 18967 | + | lncRNA gene | predicted gene, 30405 | |
Gm12877 | 4 | 22194 | - | pseudogene | predicted gene 12877 | |
Gm12874 | 4 | 1084 | + | pseudogene | predicted gene 12874 | |
Gm12875 | 4 | 7980 | - | pseudogene | predicted gene 12875 | |
Gm12876 | 4 | 16355 | - | pseudogene | predicted gene 12876 | |
Tssr38821 | 4 | 10 | + | TSS region | transcription start site region 38821 | |
Tssr1287 | 4 | 4 | + | TSS region | transcription start site region 1287 | |
Tssr38822 | 4 | 11 | + | TSS region | transcription start site region 38822 | |
Tssr43201 | 4 | 5 | - | TSS region | transcription start site region 43201 | |
Tssr38823 | 4 | 5 | + | TSS region | transcription start site region 38823 | |
Tssr38824 | 4 | 21 | + | TSS region | transcription start site region 38824 | |
9530002B09Rik | 4 | 15854 | + | protein coding gene | RIKEN cDNA 9530002B09 gene | |
Tssr38825 | 4 | 29 | + | TSS region | transcription start site region 38825 | |
Tssr38826 | 4 | 39 | + | TSS region | transcription start site region 38826 | |
Tssr38827 | 4 | 8 | + | TSS region | transcription start site region 38827 | |
Tssr1288 | 4 | 9 | + | TSS region | transcription start site region 1288 | |
Tssr38828 | 4 | 5 | + | TSS region | transcription start site region 38828 | |
Gm30548 | 4 | 13069 | - | lncRNA gene | predicted gene, 30548 | |
Gm12872 | 4 | 4449 | - | pseudogene | predicted gene 12872 | |
Gm12873 | 4 | 15595 | - | pseudogene | predicted gene 12873 | |
Tssr43202 | 4 | 18 | - | TSS region | transcription start site region 43202 | |
Cpgi14736 | 4 | 570 | CpG island | CpG island 14736 | ||
Tssr38829 | 4 | 17 | + | TSS region | transcription start site region 38829 | |
Tssr38830 | 4 | 23 | + | TSS region | transcription start site region 38830 | |
Ppt1 | 4 | 22933 | + | protein coding gene | palmitoyl-protein thioesterase 1 | |
Tssr38831 | 4 | 38 | + | TSS region | transcription start site region 38831 | |
Tssr38832 | 4 | 3 | + | TSS region | transcription start site region 38832 | |
Cap1 | 4 | 27009 | - | protein coding gene | CAP, adenylate cyclase-associated protein 1 (yeast) | |
Tssr43203 | 4 | 5 | - | TSS region | transcription start site region 43203 | |
Tssr43204 | 4 | 34 | - | TSS region | transcription start site region 43204 | |
Tssr43205 | 4 | 17 | - | TSS region | transcription start site region 43205 | |
Tssr43206 | 4 | 32 | - | TSS region | transcription start site region 43206 | |
Tssr43207 | 4 | 19 | - | TSS region | transcription start site region 43207 | |
Tssr43208 | 4 | 14 | - | TSS region | transcription start site region 43208 | |
Tssr43209 | 4 | 14 | - | TSS region | transcription start site region 43209 | |
Tssr43210 | 4 | 50 | - | TSS region | transcription start site region 43210 | |
Tssr43211 | 4 | 58 | - | TSS region | transcription start site region 43211 | |
Tssr43212 | 4 | 51 | - | TSS region | transcription start site region 43212 | |
Tssr43213 | 4 | 46 | - | TSS region | transcription start site region 43213 | |
Tssr43214 | 4 | 31 | - | TSS region | transcription start site region 43214 | |
Cpgi14737 | 4 | 1273 | CpG island | CpG island 14737 | ||
Tssr43215 | 4 | 6 | - | TSS region | transcription start site region 43215 | |
Tssr43216 | 4 | 63 | - | TSS region | transcription start site region 43216 | |
Tssr43217 | 4 | 14 | - | TSS region | transcription start site region 43217 | |
Tssr43218 | 4 | 42 | - | TSS region | transcription start site region 43218 | |
Tssr43219 | 4 | 11 | - | TSS region | transcription start site region 43219 | |
Tssr43220 | 4 | 11 | - | TSS region | transcription start site region 43220 | |
Tssr43221 | 4 | 24 | - | TSS region | transcription start site region 43221 | |
Tssr43222 | 4 | 1 | - | TSS region | transcription start site region 43222 | |
Tssr43223 | 4 | 16 | - | TSS region | transcription start site region 43223 | |
Tssr38833 | 4 | 55 | + | TSS region | transcription start site region 38833 |