Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:120546935-120786943

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctps 4 120539868 to 120570276 30408 - protein coding gene cytidine 5'-triphosphate synthase
Cpgi14715 4 120569485 to 120570769 1284 CpG island CpG island 14715
Tssr43151 4 120570216 to 120570234 18 - TSS region transcription start site region 43151
Tssr43152 4 120570252 to 120570299 47 - TSS region transcription start site region 43152
Tssr1282 4 120570307 to 120570311 4 - TSS region transcription start site region 1282
Tssr38798 4 120588728 to 120588739 11 + TSS region transcription start site region 38798
Gm8439 4 120588745 to 120609673 20928 + protein coding gene predicted gene 8439
D4Mit76 4 120605063 to 120605244 181 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 76
Tssr43153 4 120613870 to 120613882 12 - TSS region transcription start site region 43153
Tssr38799 4 120615816 to 120615832 16 + TSS region transcription start site region 38799
Gm12860 4 120615840 to 120622682 6842 + lincRNA gene predicted gene 12860
Gm45579 4 120644219 to 120648137 3918 - lincRNA gene predicted gene 45579
Cpgi14716 4 120649455 to 120650367 912 CpG island CpG island 14716
Gm29891 4 120659638 to 120663276 3638 + lncRNA gene predicted gene, 29891
D4Dcr19 4 120665728 to 120665823 95 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 19
Cpgi14717 4 120666463 to 120667695 1232 CpG island CpG island 14717
Tssr38800 4 120666562 to 120666579 17 + TSS region transcription start site region 38800
Cited4 4 120666572 to 120667820 1248 + protein coding gene Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
Tssr38801 4 120666614 to 120666623 9 + TSS region transcription start site region 38801
Tssr38802 4 120666935 to 120666943 8 + TSS region transcription start site region 38802
Tssr38803 4 120667159 to 120667172 13 + TSS region transcription start site region 38803
Kcnq4 4 120696134 to 120747491 51357 - protein coding gene potassium voltage-gated channel, subfamily Q, member 4
Cpgi14718 4 120697853 to 120698256 403 CpG island CpG island 14718
Cpgi14719 4 120716392 to 120716991 599 CpG island CpG island 14719
Cpgi14720 4 120731185 to 120731584 399 CpG island CpG island 14720
Cpgi14721 4 120746482 to 120748285 1803 CpG island CpG island 14721
Tssr43154 4 120746909 to 120746969 60 - TSS region transcription start site region 43154
Tssr43155 4 120747395 to 120747404 9 - TSS region transcription start site region 43155
Cpgi14722 4 120748486 to 120748862 376 CpG island CpG island 14722
Nfyc 4 120757438 to 120831572 74134 - protein coding gene nuclear transcription factor-Y gamma
Mirc39 4 120769534 to 120772697 3163 complex/cluster/region micro RNA cluster 39, including Mir30c-1 through Mir31e
Mir30c-1 4 120769534 to 120769622 88 - miRNA gene microRNA 30c-1
Mir30e 4 120772606 to 120772697 91 - miRNA gene microRNA 30e
Mir30f 4 120772606 to 120772697 91 + miRNA gene microRNA 30f