Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:120225288-120585404

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq1 4 117320449 to 120250558 2930109 QTL conditioned fear QTL 1
Gm36134 4 120154185 to 120262151 107966 - lncRNA gene predicted gene, 36134
Cpgi14711 4 120266959 to 120269245 2286 CpG island CpG island 14711
Foxo6 4 120267078 to 120287261 20183 - protein coding gene forkhead box O6
Cpgi14712 4 120282308 to 120283292 984 CpG island CpG island 14712
Cpgi14713 4 120286625 to 120288337 1712 CpG island CpG island 14713
Tssr43147 4 120286985 to 120286988 3 - TSS region transcription start site region 43147
Tssr43148 4 120287670 to 120287683 13 - TSS region transcription start site region 43148
Tssr43149 4 120287696 to 120287754 58 - TSS region transcription start site region 43149
Tssr38782 4 120291343 to 120291354 11 + TSS region transcription start site region 38782
Foxo6os 4 120291350 to 120303892 12542 + antisense lncRNA gene forkhead box O6, opposite strand
Gm36499 4 120309702 to 120312945 3243 - lncRNA gene predicted gene, 36499
Gm36574 4 120319102 to 120397176 78074 - lncRNA gene predicted gene, 36574
Tssr38783 4 120338396 to 120338398 2 + TSS region transcription start site region 38783
Cpgi14714 4 120404925 to 120406065 1140 CpG island CpG island 14714
Tssr38784 4 120405173 to 120405221 48 + TSS region transcription start site region 38784
Tssr38785 4 120405259 to 120405287 28 + TSS region transcription start site region 38785
Scmh1 4 120405281 to 120530186 124905 + protein coding gene sex comb on midleg homolog 1
Tssr38786 4 120405288 to 120405404 116 + TSS region transcription start site region 38786
Tssr38787 4 120432852 to 120432858 6 + TSS region transcription start site region 38787
Tssr38788 4 120450001 to 120450006 5 + TSS region transcription start site region 38788
Tssr38789 4 120450409 to 120450412 3 + TSS region transcription start site region 38789
Tssr38790 4 120483298 to 120483303 5 + TSS region transcription start site region 38790
Tssr38791 4 120516774 to 120516788 14 + TSS region transcription start site region 38791
Tssr38792 4 120517494 to 120517500 6 + TSS region transcription start site region 38792
Tssr38793 4 120517587 to 120517615 28 + TSS region transcription start site region 38793
Tssr38794 4 120517616 to 120517638 22 + TSS region transcription start site region 38794
Tssr38795 4 120517640 to 120517659 19 + TSS region transcription start site region 38795
Tssr43150 4 120532109 to 120532122 13 - TSS region transcription start site region 43150
Tssr38796 4 120532219 to 120532256 37 + TSS region transcription start site region 38796
Slfnl1 4 120532231 to 120536661 4430 + protein coding gene schlafen like 1
Tssr38797 4 120532260 to 120532265 5 + TSS region transcription start site region 38797
Ctps 4 120539868 to 120570276 30408 - protein coding gene cytidine 5'-triphosphate synthase
Cpgi14715 4 120569485 to 120570769 1284 CpG island CpG island 14715
Tssr43151 4 120570216 to 120570234 18 - TSS region transcription start site region 43151
Tssr43152 4 120570252 to 120570299 47 - TSS region transcription start site region 43152
Tssr1282 4 120570307 to 120570311 4 - TSS region transcription start site region 1282