MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:120214702-120407945

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfq1	4	117320449 to 120250558	2930109		QTL	conditioned fear QTL 1
Gm36134	4	120154185 to 120262151	107966	-	lncRNA gene	predicted gene, 36134
Cpgi14711	4	120266959 to 120269245	2286		CpG island	CpG island 14711
Foxo6	4	120267078 to 120287261	20183	-	protein coding gene	forkhead box O6
Cpgi14712	4	120282308 to 120283292	984		CpG island	CpG island 14712
Cpgi14713	4	120286625 to 120288337	1712		CpG island	CpG island 14713
Tssr43147	4	120286985 to 120286988	3	-	TSS region	transcription start site region 43147
Tssr43148	4	120287670 to 120287683	13	-	TSS region	transcription start site region 43148
Tssr43149	4	120287696 to 120287754	58	-	TSS region	transcription start site region 43149
Tssr38782	4	120291343 to 120291354	11	+	TSS region	transcription start site region 38782
Foxo6os	4	120291350 to 120303892	12542	+	antisense lncRNA gene	forkhead box O6, opposite strand
Gm36499	4	120309702 to 120312945	3243	-	lncRNA gene	predicted gene, 36499
Gm36574	4	120319102 to 120397176	78074	-	lncRNA gene	predicted gene, 36574
Tssr38783	4	120338396 to 120338398	2	+	TSS region	transcription start site region 38783
Cpgi14714	4	120404925 to 120406065	1140		CpG island	CpG island 14714
Tssr38784	4	120405173 to 120405221	48	+	TSS region	transcription start site region 38784
Tssr38785	4	120405259 to 120405287	28	+	TSS region	transcription start site region 38785
Scmh1	4	120405281 to 120530186	124905	+	protein coding gene	sex comb on midleg homolog 1
Tssr38786	4	120405288 to 120405404	116	+	TSS region	transcription start site region 38786