Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:119315006-119515689

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34 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppih 4 119300010 to 119320523 20513 - protein coding gene peptidyl prolyl isomerase H
Cpgi14699 4 119320093 to 119320735 642 CpG island CpG island 14699
Tssr43107 4 119320496 to 119320516 20 - TSS region transcription start site region 43107
Tssr38734 4 119320575 to 119320630 55 + TSS region transcription start site region 38734
Ccdc30 4 119322468 to 119415521 93053 - protein coding gene coiled-coil domain containing 30
Tssr43108 4 119333619 to 119333632 13 - TSS region transcription start site region 43108
Ldha-ps2 4 119334389 to 119335445 1056 - pseudogene lactate dehydrogenase A, pseudogene 2
Tssr43109 4 119335543 to 119335544 1 - TSS region transcription start site region 43109
Cpgi14700 4 119359504 to 119359866 362 CpG island CpG island 14700
Tssr43110 4 119359786 to 119359810 24 - TSS region transcription start site region 43110
Tssr43111 4 119359882 to 119359897 15 - TSS region transcription start site region 43111
Tssr43112 4 119359900 to 119359917 17 - TSS region transcription start site region 43112
Tssr43113 4 119383732 to 119383780 48 - TSS region transcription start site region 43113
Tssr43114 4 119383805 to 119383810 5 - TSS region transcription start site region 43114
Tssr43115 4 119383828 to 119383839 11 - TSS region transcription start site region 43115
Gm50484 4 119393500 to 119399924 6424 + lncRNA gene predicted gene, 50484
Tssr43116 4 119404784 to 119404832 48 - TSS region transcription start site region 43116
Cpgi14701 4 119415006 to 119415689 683 CpG island CpG island 14701
Tssr43117 4 119415443 to 119415459 16 - TSS region transcription start site region 43117
Tssr43118 4 119415471 to 119415487 16 - TSS region transcription start site region 43118
Tssr43119 4 119415494 to 119415522 28 - TSS region transcription start site region 43119
Ppcs 4 119418530 to 119422420 3890 - protein coding gene phosphopantothenoylcysteine synthetase
Cpgi14702 4 119421748 to 119423160 1412 CpG island CpG island 14702
Tssr43120 4 119422355 to 119422418 63 - TSS region transcription start site region 43120
Zmynd12 4 119422611 to 119453899 31288 + protein coding gene zinc finger, MYND domain containing 12
Tssr38735 4 119422806 to 119422841 35 + TSS region transcription start site region 38735
Tssr38736 4 119422842 to 119422881 39 + TSS region transcription start site region 38736
D4Ertd669e 4 119460875 to 119461084 209 DNA segment DNA segment, Chr 4, ERATO Doi 669, expressed
Rimkla 4 119465283 to 119492598 27315 - protein coding gene ribosomal modification protein rimK-like family member A
Cpgi14703 4 119492028 to 119493123 1095 CpG island CpG island 14703
Tssr43121 4 119492547 to 119492561 14 - TSS region transcription start site region 43121
Tssr43122 4 119492563 to 119492618 55 - TSS region transcription start site region 43122
Gm12954 4 119501865 to 119502546 681 - pseudogene predicted gene 12954
Gm12956 4 119509648 to 119510061 413 - pseudogene predicted gene 12956