Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:119275575-119365630

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ybx1 4 119277981 to 119294604 16623 - protein coding gene Y box protein 1
Tssr43098 4 119279106 to 119279120 14 - TSS region transcription start site region 43098
Tssr43099 4 119282253 to 119282280 27 - TSS region transcription start site region 43099
Cpgi14698 4 119293479 to 119295096 1617 CpG island CpG island 14698
1700102N10Rik 4 119294136 to 119295146 1010 unclassified non-coding RNA gene RIKEN cDNA 1700102N10 gene
Tssr38733 4 119294175 to 119294191 16 + TSS region transcription start site region 38733
Tssr43100 4 119294238 to 119294310 72 - TSS region transcription start site region 43100
Tssr43101 4 119294400 to 119294445 45 - TSS region transcription start site region 43101
Tssr43102 4 119294447 to 119294470 23 - TSS region transcription start site region 43102
Tssr43103 4 119294500 to 119294518 18 - TSS region transcription start site region 43103
Tssr43104 4 119294520 to 119294538 18 - TSS region transcription start site region 43104
Tssr43105 4 119294714 to 119294725 11 - TSS region transcription start site region 43105
Tssr43106 4 119294744 to 119294753 9 - TSS region transcription start site region 43106
Gm37817 4 119295028 to 119295461 433 - unclassified gene predicted gene, 37817
Ppih 4 119300010 to 119320523 20513 - protein coding gene peptidyl prolyl isomerase H
Cpgi14699 4 119320093 to 119320735 642 CpG island CpG island 14699
Tssr43107 4 119320496 to 119320516 20 - TSS region transcription start site region 43107
Tssr38734 4 119320575 to 119320630 55 + TSS region transcription start site region 38734
Ccdc30 4 119322893 to 119415521 92628 - protein coding gene coiled-coil domain containing 30
Tssr43108 4 119333619 to 119333632 13 - TSS region transcription start site region 43108
Ldha-ps2 4 119334389 to 119335445 1056 - pseudogene lactate dehydrogenase A, pseudogene 2
Tssr43109 4 119335543 to 119335544 1 - TSS region transcription start site region 43109
Cpgi14700 4 119359504 to 119359866 362 CpG island CpG island 14700
Tssr43110 4 119359786 to 119359810 24 - TSS region transcription start site region 43110
Tssr43111 4 119359882 to 119359897 15 - TSS region transcription start site region 43111
Tssr43112 4 119359900 to 119359917 17 - TSS region transcription start site region 43112