Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:119237253-119327280

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
P3h1 4 119232915 to 119248975 16060 + protein coding gene prolyl 3-hydroxylase 1
Gm12927 4 119252523 to 119256975 4452 - antisense lncRNA gene predicted gene 12927
Tssr38727 4 119255393 to 119255426 33 + TSS region transcription start site region 38727
Tssr38728 4 119255427 to 119255456 29 + TSS region transcription start site region 38728
Cldn19 4 119255441 to 119262438 6997 + protein coding gene claudin 19
Tssr38729 4 119255465 to 119255493 28 + TSS region transcription start site region 38729
Tssr38730 4 119255494 to 119255504 10 + TSS region transcription start site region 38730
Tssr43097 4 119257153 to 119257173 20 - TSS region transcription start site region 43097
Tssr38731 4 119257412 to 119257428 16 + TSS region transcription start site region 38731
Tssr38732 4 119262264 to 119262266 2 + TSS region transcription start site region 38732
Ybx1 4 119277981 to 119294604 16623 - protein coding gene Y box protein 1
Tssr43098 4 119279106 to 119279120 14 - TSS region transcription start site region 43098
Tssr43099 4 119282253 to 119282280 27 - TSS region transcription start site region 43099
Cpgi14698 4 119293479 to 119295096 1617 CpG island CpG island 14698
1700102N10Rik 4 119294136 to 119295146 1010 unclassified non-coding RNA gene RIKEN cDNA 1700102N10 gene
Tssr38733 4 119294175 to 119294191 16 + TSS region transcription start site region 38733
Tssr43100 4 119294238 to 119294310 72 - TSS region transcription start site region 43100
Tssr43101 4 119294400 to 119294445 45 - TSS region transcription start site region 43101
Tssr43102 4 119294447 to 119294470 23 - TSS region transcription start site region 43102
Tssr43103 4 119294500 to 119294518 18 - TSS region transcription start site region 43103
Tssr43104 4 119294520 to 119294538 18 - TSS region transcription start site region 43104
Tssr43105 4 119294714 to 119294725 11 - TSS region transcription start site region 43105
Tssr43106 4 119294744 to 119294753 9 - TSS region transcription start site region 43106
Gm37817 4 119295028 to 119295461 433 - unclassified gene predicted gene, 37817
Ppih 4 119300010 to 119320523 20513 - protein coding gene peptidyl prolyl isomerase H
Cpgi14699 4 119320093 to 119320735 642 CpG island CpG island 14699
Tssr43107 4 119320496 to 119320516 20 - TSS region transcription start site region 43107
Tssr38734 4 119320575 to 119320630 55 + TSS region transcription start site region 38734
Ccdc30 4 119322893 to 119415521 92628 - protein coding gene coiled-coil domain containing 30