Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:118961797-119091811

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr38679 4 118961866 to 118961871 5 + TSS region transcription start site region 38679
Tssr38680 4 118961942 to 118961961 19 + TSS region transcription start site region 38680
Lao1 4 118961967 to 118968910 6943 + protein coding gene L-amino acid oxidase 1
Tssr38681 4 118961984 to 118962001 17 + TSS region transcription start site region 38681
Tssr38682 4 118963790 to 118963796 6 + TSS region transcription start site region 38682
Tssr38683 4 118964177 to 118964181 4 + TSS region transcription start site region 38683
Tssr38684 4 118964192 to 118964200 8 + TSS region transcription start site region 38684
Tssr38685 4 118964208 to 118964219 11 + TSS region transcription start site region 38685
Tssr38686 4 118964220 to 118964223 3 + TSS region transcription start site region 38686
Tssr38687 4 118965326 to 118965337 11 + TSS region transcription start site region 38687
Tssr38688 4 118967833 to 118967838 5 + TSS region transcription start site region 38688
Tssr43075 4 118967993 to 118967998 5 - TSS region transcription start site region 43075
Tssr38689 4 118968092 to 118968100 8 + TSS region transcription start site region 38689
Tssr38690 4 118968156 to 118968169 13 + TSS region transcription start site region 38690
Tssr43076 4 118968618 to 118968632 14 - TSS region transcription start site region 43076
Gm12861 4 118971297 to 118999458 28161 + unclassified non-coding RNA gene predicted gene 12861
Gm24352 4 118980318 to 118980442 124 + snoRNA gene predicted gene, 24352
Gm12865 4 118984058 to 118997198 13140 - lincRNA gene predicted gene 12865
Tssr38691 4 118986942 to 118986944 2 + TSS region transcription start site region 38691
Gm12864 4 118987014 to 118988019 1005 + pseudogene predicted gene 12864
Tssr38692 4 118987470 to 118987471 1 + TSS region transcription start site region 38692
Gm12862 4 118999660 to 119000485 825 - lincRNA gene predicted gene 12862
Svwq1 4 119000000 to 90000000 -29000000 QTL seminal vesicle weight QTL 1
Tssr38693 4 119026797 to 119026811 14 + TSS region transcription start site region 38693
Lincred2 4 119050708 to 119061964 11256 + lncRNA gene long intergenic non-protein coding RNA of erythroid differentiation 2
Gm12866 4 119054790 to 119069111 14321 - lincRNA gene predicted gene 12866
Tssr38694 4 119072078 to 119072089 11 + TSS region transcription start site region 38694
Tssr43077 4 119072924 to 119072941 17 - TSS region transcription start site region 43077
Tssr43078 4 119072958 to 119072967 9 - TSS region transcription start site region 43078
Gm35510 4 119073001 to 119084352 11351 + lncRNA gene predicted gene, 35510