Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:118957078-119187089

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr38676 4 118961599 to 118961612 13 + TSS region transcription start site region 38676
Tssr38677 4 118961691 to 118961698 7 + TSS region transcription start site region 38677
Tssr38678 4 118961725 to 118961735 10 + TSS region transcription start site region 38678
Tssr38679 4 118961866 to 118961871 5 + TSS region transcription start site region 38679
Tssr38680 4 118961942 to 118961961 19 + TSS region transcription start site region 38680
Lao1 4 118961967 to 118968910 6943 + protein coding gene L-amino acid oxidase 1
Tssr38681 4 118961984 to 118962001 17 + TSS region transcription start site region 38681
Tssr38682 4 118963790 to 118963796 6 + TSS region transcription start site region 38682
Tssr38683 4 118964177 to 118964181 4 + TSS region transcription start site region 38683
Tssr38684 4 118964192 to 118964200 8 + TSS region transcription start site region 38684
Tssr38685 4 118964208 to 118964219 11 + TSS region transcription start site region 38685
Tssr38686 4 118964220 to 118964223 3 + TSS region transcription start site region 38686
Tssr38687 4 118965326 to 118965337 11 + TSS region transcription start site region 38687
Tssr38688 4 118967833 to 118967838 5 + TSS region transcription start site region 38688
Tssr43075 4 118967993 to 118967998 5 - TSS region transcription start site region 43075
Tssr38689 4 118968092 to 118968100 8 + TSS region transcription start site region 38689
Tssr38690 4 118968156 to 118968169 13 + TSS region transcription start site region 38690
Tssr43076 4 118968618 to 118968632 14 - TSS region transcription start site region 43076
Gm12861 4 118971297 to 118999458 28161 + unclassified non-coding RNA gene predicted gene 12861
Gm24352 4 118980318 to 118980442 124 + snoRNA gene predicted gene, 24352
Gm12865 4 118984058 to 118997198 13140 - lincRNA gene predicted gene 12865
Tssr38691 4 118986942 to 118986944 2 + TSS region transcription start site region 38691
Gm12864 4 118987014 to 118988019 1005 + pseudogene predicted gene 12864
Tssr38692 4 118987470 to 118987471 1 + TSS region transcription start site region 38692
Gm12862 4 118999660 to 119000485 825 - lincRNA gene predicted gene 12862
Svwq1 4 119000000 to 90000000 -29000000 QTL seminal vesicle weight QTL 1
Tssr38693 4 119026797 to 119026811 14 + TSS region transcription start site region 38693
Lincred2 4 119050708 to 119061964 11256 + lncRNA gene long intergenic non-protein coding RNA of erythroid differentiation 2
Gm12866 4 119054790 to 119069111 14321 - lincRNA gene predicted gene 12866
Tssr38694 4 119072078 to 119072089 11 + TSS region transcription start site region 38694
Tssr43077 4 119072924 to 119072941 17 - TSS region transcription start site region 43077
Tssr43078 4 119072958 to 119072967 9 - TSS region transcription start site region 43078
Gm35510 4 119073001 to 119084352 11351 + lncRNA gene predicted gene, 35510
Cpgi14691 4 119105753 to 119106043 290 CpG island CpG island 14691
Tssr38695 4 119106017 to 119106034 17 + TSS region transcription start site region 38695
Tssr38696 4 119106037 to 119106048 11 + TSS region transcription start site region 38696
Tssr38697 4 119106057 to 119106066 9 + TSS region transcription start site region 38697
Tssr43079 4 119107978 to 119107998 20 - TSS region transcription start site region 43079
Cpgi14692 4 119108289 to 119109503 1214 CpG island CpG island 14692
Tssr38698 4 119108736 to 119108758 22 + TSS region transcription start site region 38698
Slc2a1 4 119108745 to 119137330 28585 + protein coding gene solute carrier family 2 (facilitated glucose transporter), member 1
Tssr38699 4 119108795 to 119108812 17 + TSS region transcription start site region 38699
Tssr38700 4 119109280 to 119109330 50 + TSS region transcription start site region 38700
Eosnp2 4 119115104 to 119115104 0 QTL percent eosinophils 2
Tssr38701 4 119120414 to 119120459 45 + TSS region transcription start site region 38701
Tssr38702 4 119126213 to 119126223 10 + TSS region transcription start site region 38702
Tssr43080 4 119127332 to 119127369 37 - TSS region transcription start site region 43080
Mir1957a 4 119129779 to 119129844 65 + miRNA gene microRNA 1957a
Gm12867 4 119130292 to 119131001 709 - antisense lncRNA gene predicted gene 12867
Tssr38703 4 119132156 to 119132212 56 + TSS region transcription start site region 38703
Tssr38704 4 119132229 to 119132244 15 + TSS region transcription start site region 38704
Tssr38705 4 119132624 to 119132638 14 + TSS region transcription start site region 38705
Tssr38706 4 119133184 to 119133220 36 + TSS region transcription start site region 38706
Tssr38707 4 119133427 to 119133490 63 + TSS region transcription start site region 38707
Gm12868 4 119133749 to 119138801 5052 - antisense lncRNA gene predicted gene 12868
Tssr38708 4 119136253 to 119136265 12 + TSS region transcription start site region 38708
Tssr38709 4 119136550 to 119136573 23 + TSS region transcription start site region 38709
Tssr38710 4 119136622 to 119136642 20 + TSS region transcription start site region 38710
Tssr38711 4 119136685 to 119136696 11 + TSS region transcription start site region 38711
Tssr38712 4 119136714 to 119136719 5 + TSS region transcription start site region 38712
Tssr38713 4 119136777 to 119136788 11 + TSS region transcription start site region 38713
Tssr38714 4 119136826 to 119136858 32 + TSS region transcription start site region 38714
Tssr38715 4 119136873 to 119136889 16 + TSS region transcription start site region 38715
Tssr38716 4 119136890 to 119136917 27 + TSS region transcription start site region 38716
Tssr38717 4 119137050 to 119137077 27 + TSS region transcription start site region 38717
Cpgi14693 4 119138339 to 119138507 168 CpG island CpG island 14693
Cpgi14694 4 119142402 to 119142741 339 CpG island CpG island 14694
Zfp691 4 119169516 to 119174195 4679 - protein coding gene zinc finger protein 691
Tssr43081 4 119169965 to 119169969 4 - TSS region transcription start site region 43081
Cpgi14695 4 119173795 to 119174410 615 CpG island CpG island 14695
Tssr43082 4 119173849 to 119173901 52 - TSS region transcription start site region 43082
Tssr43083 4 119174178 to 119174221 43 - TSS region transcription start site region 43083
Ermap 4 119175457 to 119190011 14554 - protein coding gene erythroblast membrane-associated protein
Tssr43084 4 119176715 to 119176765 50 - TSS region transcription start site region 43084
Tssr43085 4 119176812 to 119176833 21 - TSS region transcription start site region 43085
Tssr43086 4 119184007 to 119184025 18 - TSS region transcription start site region 43086