MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:117877267-117897278

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
B4galt2	4	117873000 to 117883482	10482	-	protein coding gene	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
Gm40233	4	117874528 to 117879336	4808	+	lncRNA gene	predicted gene, 40233
Cpgi14670	4	117882697 to 117883844	1147		CpG island	CpG island 14670
Tssr43002	4	117883428 to 117883507	79	-	TSS region	transcription start site region 43002
Tssr38640	4	117883542 to 117883579	37	+	TSS region	transcription start site region 38640
Tssr38641	4	117883597 to 117883610	13	+	TSS region	transcription start site region 38641
Gm12841	4	117883621 to 117885995	2374	+	antisense lncRNA gene	predicted gene 12841
Atp6v0b	4	117884330 to 117887329	2999	-	protein coding gene	ATPase, H+ transporting, lysosomal V0 subunit B
Tssr43003	4	117884497 to 117884528	31	-	TSS region	transcription start site region 43003
Cpgi14671	4	117886756 to 117887758	1002		CpG island	CpG island 14671
Tssr43004	4	117887247 to 117887254	7	-	TSS region	transcription start site region 43004
Tssr43005	4	117887267 to 117887278	11	-	TSS region	transcription start site region 43005
Tssr43006	4	117887279 to 117887290	11	-	TSS region	transcription start site region 43006
Tssr43007	4	117887292 to 117887353	61	-	TSS region	transcription start site region 43007
Dph2	4	117888643 to 117892003	3360	-	protein coding gene	DPH2 homolog
Cpgi14672	4	117891588 to 117892262	674		CpG island	CpG island 14672
Tssr43008	4	117891994 to 117892040	46	-	TSS region	transcription start site region 43008
Ipo13	4	117894486 to 117914999	20513	-	protein coding gene	importin 13