Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:117483823-117544201

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf220 4 117271463 to 117497052 225589 - protein coding gene ring finger protein 220
Cpgi14662 4 117484089 to 117485400 1311 CpG island CpG island 14662
Tssr42984 4 117489939 to 117489958 19 - TSS region transcription start site region 42984
Cpgi14663 4 117493876 to 117497082 3206 CpG island CpG island 14663
Tssr42985 4 117494977 to 117494996 19 - TSS region transcription start site region 42985
Tssr42986 4 117495661 to 117495665 4 - TSS region transcription start site region 42986
Tssr38615 4 117496420 to 117496463 43 + TSS region transcription start site region 38615
Gm12827 4 117496452 to 117500602 4150 + lincRNA gene predicted gene 12827
Tssr42987 4 117496909 to 117496918 9 - TSS region transcription start site region 42987
Tssr42988 4 117496940 to 117496957 17 - TSS region transcription start site region 42988
Tssr42989 4 117497075 to 117497076 1 - TSS region transcription start site region 42989
Cpgi14664 4 117508788 to 117509042 254 CpG island CpG island 14664
Gm34669 4 117509361 to 117519599 10238 + lncRNA gene predicted gene, 34669
Gm12826 4 117513823 to 117514201 378 - pseudogene predicted gene 12826
D4Jcs23 4 117539922 to 117540199 277 DNA segment DNA segment, Chr 4, John C. Schimenti 23