Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:117480134-117660207

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf220 4 117271463 to 117497052 225589 - protein coding gene ring finger protein 220
D4Jpk1 4 117483155 to 117483274 119 DNA segment DNA segment, Chr 4, Japan, Kominami 1
Cpgi14662 4 117484089 to 117485400 1311 CpG island CpG island 14662
Tssr42984 4 117489939 to 117489958 19 - TSS region transcription start site region 42984
Cpgi14663 4 117493876 to 117497082 3206 CpG island CpG island 14663
Tssr42985 4 117494977 to 117494996 19 - TSS region transcription start site region 42985
Tssr42986 4 117495661 to 117495665 4 - TSS region transcription start site region 42986
Tssr38615 4 117496420 to 117496463 43 + TSS region transcription start site region 38615
Gm12827 4 117496452 to 117500602 4150 + lincRNA gene predicted gene 12827
Tssr42987 4 117496909 to 117496918 9 - TSS region transcription start site region 42987
Tssr42988 4 117496940 to 117496957 17 - TSS region transcription start site region 42988
Tssr42989 4 117497075 to 117497076 1 - TSS region transcription start site region 42989
Cpgi14664 4 117508788 to 117509042 254 CpG island CpG island 14664
Gm34669 4 117509361 to 117519599 10238 + lncRNA gene predicted gene, 34669
Gm12826 4 117513823 to 117514201 378 - pseudogene predicted gene 12826
D4Jcs23 4 117539922 to 117540199 277 DNA segment DNA segment, Chr 4, John C. Schimenti 23
Cpgi14665 4 117550110 to 117550893 783 CpG island CpG island 14665
Tssr38616 4 117550305 to 117550316 11 + TSS region transcription start site region 38616
Tssr38617 4 117550326 to 117550409 83 + TSS region transcription start site region 38617
Eri3 4 117550365 to 117674297 123932 + protein coding gene exoribonuclease 3
Tssr38618 4 117550657 to 117550691 34 + TSS region transcription start site region 38618
Tssr38619 4 117552952 to 117552967 15 + TSS region transcription start site region 38619
Tssr38620 4 117560472 to 117560476 4 + TSS region transcription start site region 38620
Tssr38621 4 117563830 to 117563834 4 + TSS region transcription start site region 38621
Tssr38622 4 117564603 to 117564642 39 + TSS region transcription start site region 38622
Tssr38623 4 117564807 to 117564825 18 + TSS region transcription start site region 38623
Gm25559 4 117570134 to 117570207 73 + miRNA gene predicted gene, 25559
Tssr38624 4 117585300 to 117585311 11 + TSS region transcription start site region 38624
Gm19192 4 117598836 to 117599393 557 + pseudogene predicted gene, 19192
Tssr38625 4 117609744 to 117609757 13 + TSS region transcription start site region 38625
Tssr38626 4 117610823 to 117610828 5 + TSS region transcription start site region 38626
Cpgi14666 4 117644997 to 117645195 198 CpG island CpG island 14666
Tssr1277 4 117649956 to 117649959 3 + TSS region transcription start site region 1277