MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:117446909-117546918

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rnf220	4	117271463 to 117497052	225589	-	protein coding gene	ring finger protein 220
D4Mit122	4	117449635 to 117449736	101		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 122
Tssr42983	4	117474019 to 117474031	12	-	TSS region	transcription start site region 42983
D4Jpk1	4	117483155 to 117483274	119		DNA segment	DNA segment, Chr 4, Japan, Kominami 1
Cpgi14662	4	117484089 to 117485400	1311		CpG island	CpG island 14662
Tssr42984	4	117489939 to 117489958	19	-	TSS region	transcription start site region 42984
Cpgi14663	4	117493876 to 117497082	3206		CpG island	CpG island 14663
Tssr42985	4	117494977 to 117494996	19	-	TSS region	transcription start site region 42985
Tssr42986	4	117495661 to 117495665	4	-	TSS region	transcription start site region 42986
Tssr38615	4	117496420 to 117496463	43	+	TSS region	transcription start site region 38615
Gm12827	4	117496452 to 117500602	4150	+	lincRNA gene	predicted gene 12827
Tssr42987	4	117496909 to 117496918	9	-	TSS region	transcription start site region 42987
Tssr42988	4	117496940 to 117496957	17	-	TSS region	transcription start site region 42988
Tssr42989	4	117497075 to 117497076	1	-	TSS region	transcription start site region 42989
Cpgi14664	4	117508788 to 117509042	254		CpG island	CpG island 14664
Gm34669	4	117509361 to 117519599	10238	+	lncRNA gene	predicted gene, 34669
Gm12826	4	117513823 to 117514201	378	-	pseudogene	predicted gene 12826
D4Jcs23	4	117539922 to 117540199	277		DNA segment	DNA segment, Chr 4, John C. Schimenti 23