Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:117227640-117327652

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Armh1 4 117213326 to 117251973 38647 - protein coding gene armadillo-like helical domain containing 1
Cpgi14655 4 117229701 to 117229870 169 CpG island CpG island 14655
Cpgi14656 4 117251568 to 117252221 653 CpG island CpG island 14656
Tssr42969 4 117251773 to 117251807 34 - TSS region transcription start site region 42969
Tssr42970 4 117251810 to 117251831 21 - TSS region transcription start site region 42970
Tssr42971 4 117251839 to 117251874 35 - TSS region transcription start site region 42971
Tssr42972 4 117251879 to 117251891 12 - TSS region transcription start site region 42972
Tmem53 4 117251951 to 117268582 16631 + protein coding gene transmembrane protein 53
Tssr38609 4 117251977 to 117252004 27 + TSS region transcription start site region 38609
Tssr38610 4 117252010 to 117252057 47 + TSS region transcription start site region 38610
Tssr42973 4 117252232 to 117252255 23 - TSS region transcription start site region 42973
Cpgi14657 4 117267956 to 117268282 326 CpG island CpG island 14657
Rnf220 4 117271463 to 117497052 225589 - protein coding gene ring finger protein 220
Tssr1275 4 117272150 to 117272162 12 + TSS region transcription start site region 1275
Tssr42974 4 117277640 to 117277652 12 - TSS region transcription start site region 42974
Tssr42975 4 117277656 to 117277669 13 - TSS region transcription start site region 42975
Tssr42976 4 117277676 to 117277683 7 - TSS region transcription start site region 42976
Tssr42977 4 117277712 to 117277723 11 - TSS region transcription start site region 42977
Tssr42978 4 117288525 to 117288572 47 - TSS region transcription start site region 42978
Cpgi14658 4 117288677 to 117289840 1163 CpG island CpG island 14658
Tssr42979 4 117289435 to 117289455 20 - TSS region transcription start site region 42979
Gm12843 4 117295817 to 117297725 1908 + antisense lncRNA gene predicted gene 12843
Cpgi14659 4 117303598 to 117304790 1192 CpG island CpG island 14659
Gm40231 4 117311744 to 117319430 7686 - lncRNA gene predicted gene, 40231
Cpgi14660 4 117312325 to 117312831 506 CpG island CpG island 14660
Cpgi14661 4 117317960 to 117318204 244 CpG island CpG island 14661
Cfq1 4 117320449 to 120250558 2930109 QTL conditioned fear QTL 1