Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:117126116-117166326

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr38603 4 117126767 to 117126774 7 + TSS region transcription start site region 38603
Tssr38604 4 117126776 to 117126797 21 + TSS region transcription start site region 38604
Tctex1d4 4 117126794 to 117128738 1944 + protein coding gene Tctex1 domain containing 4
Tssr38605 4 117126800 to 117126818 18 + TSS region transcription start site region 38605
Plk3 4 117128655 to 117133963 5308 - protein coding gene polo like kinase 3
Tssr42952 4 117131437 to 117131468 31 - TSS region transcription start site region 42952
Tssr42953 4 117131494 to 117131498 4 - TSS region transcription start site region 42953
Cpgi14650 4 117133179 to 117134218 1039 CpG island CpG island 14650
Tssr42954 4 117133953 to 117133969 16 - TSS region transcription start site region 42954
Tssr1274 4 117134134 to 117134158 24 + TSS region transcription start site region 1274
Best4-ps 4 117145257 to 117148285 3028 + pseudogene bestrophin 4, pseudogene
Cpgi14651 4 117146116 to 117146326 210 CpG island CpG island 14651
Tssr42955 4 117148223 to 117148231 8 - TSS region transcription start site region 42955
Cpgi14652 4 117148840 to 117149182 342 CpG island CpG island 14652
Tssr38606 4 117148912 to 117148914 2 + TSS region transcription start site region 38606
Gm13015 4 117148923 to 117149126 203 + pseudogene predicted gene 13015
Tssr38607 4 117153826 to 117153838 12 + TSS region transcription start site region 38607
Rps8 4 117153836 to 117156132 2296 - protein coding gene ribosomal protein S8
Gm22980 4 117154093 to 117154162 69 - snoRNA gene predicted gene, 22980
Snord38a 4 117154516 to 117154574 58 - snoRNA gene small nucleolar RNA, C/D box 38A
Gm26330 4 117155186 to 117155289 103 - snoRNA gene predicted gene, 26330
Cpgi14653 4 117155357 to 117156328 971 CpG island CpG island 14653
Snord55 4 117155771 to 117155848 77 - snoRNA gene small nucleolar RNA, C/D box 55
Tssr42956 4 117155844 to 117155848 4 - TSS region transcription start site region 42956
Tssr42957 4 117156075 to 117156085 10 - TSS region transcription start site region 42957
Tssr42958 4 117156122 to 117156143 21 - TSS region transcription start site region 42958
Tssr42959 4 117156144 to 117156174 30 - TSS region transcription start site region 42959
Tssr42960 4 117156185 to 117156197 12 - TSS region transcription start site region 42960
Tssr42961 4 117156199 to 117156227 28 - TSS region transcription start site region 42961
Gm22398 4 117158309 to 117158433 124 - miRNA gene predicted gene, 22398
Kif2c 4 117159633 to 117182624 22991 - protein coding gene kinesin family member 2C