Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eif2b3 | 4 | 67453 | + | protein coding gene | eukaryotic translation initiation factor 2B, subunit 3 | |
Cpgi14648 | 4 | 689 | CpG island | CpG island 14648 | ||
Tssr38593 | 4 | 11 | + | TSS region | transcription start site region 38593 | |
Tssr38594 | 4 | 34 | + | TSS region | transcription start site region 38594 | |
Ptch2 | 4 | 20026 | + | protein coding gene | patched 2 | |
Tssr38595 | 4 | 11 | + | TSS region | transcription start site region 38595 | |
Tssr38596 | 4 | 3 | + | TSS region | transcription start site region 38596 | |
Btbd19 | 4 | 6506 | - | protein coding gene | BTB (POZ) domain containing 19 | |
Cpgi14649 | 4 | 1135 | CpG island | CpG island 14649 | ||
Tssr42943 | 4 | 9 | - | TSS region | transcription start site region 42943 | |
Tssr42944 | 4 | 11 | - | TSS region | transcription start site region 42944 | |
Tssr42945 | 4 | 15 | - | TSS region | transcription start site region 42945 | |
Tssr38597 | 4 | 14 | + | TSS region | transcription start site region 38597 | |
Tssr38598 | 4 | 19 | + | TSS region | transcription start site region 38598 | |
Tssr38599 | 4 | 11 | + | TSS region | transcription start site region 38599 | |
Tssr42946 | 4 | 7 | - | TSS region | transcription start site region 42946 | |
Tssr42947 | 4 | 30 | - | TSS region | transcription start site region 42947 | |
Tssr42948 | 4 | 32 | - | TSS region | transcription start site region 42948 | |
Tssr42949 | 4 | 38 | - | TSS region | transcription start site region 42949 | |
Tssr38600 | 4 | 24 | + | TSS region | transcription start site region 38600 | |
Tssr38601 | 4 | 17 | + | TSS region | transcription start site region 38601 | |
Tssr38602 | 4 | 48 | + | TSS region | transcription start site region 38602 | |
Tssr42950 | 4 | 47 | - | TSS region | transcription start site region 42950 | |
Tssr42951 | 4 | 20 | - | TSS region | transcription start site region 42951 | |
Tssr38603 | 4 | 7 | + | TSS region | transcription start site region 38603 | |
Tssr38604 | 4 | 21 | + | TSS region | transcription start site region 38604 | |
Tctex1d4 | 4 | 1944 | + | protein coding gene | Tctex1 domain containing 4 | |
Tssr38605 | 4 | 18 | + | TSS region | transcription start site region 38605 | |
Plk3 | 4 | 5308 | - | protein coding gene | polo like kinase 3 | |
Tssr42952 | 4 | 31 | - | TSS region | transcription start site region 42952 | |
Tssr42953 | 4 | 4 | - | TSS region | transcription start site region 42953 | |
Cpgi14650 | 4 | 1039 | CpG island | CpG island 14650 | ||
Tssr42954 | 4 | 16 | - | TSS region | transcription start site region 42954 | |
Tssr1274 | 4 | 24 | + | TSS region | transcription start site region 1274 | |
Best4-ps | 4 | 3028 | + | pseudogene | bestrophin 4, pseudogene | |
Cpgi14651 | 4 | 210 | CpG island | CpG island 14651 | ||
Tssr42955 | 4 | 8 | - | TSS region | transcription start site region 42955 | |
Cpgi14652 | 4 | 342 | CpG island | CpG island 14652 | ||
Tssr38606 | 4 | 2 | + | TSS region | transcription start site region 38606 | |
Gm13015 | 4 | 203 | + | pseudogene | predicted gene 13015 | |
Tssr38607 | 4 | 12 | + | TSS region | transcription start site region 38607 | |
Rps8 | 4 | 2296 | - | protein coding gene | ribosomal protein S8 | |
Gm22980 | 4 | 69 | - | snoRNA gene | predicted gene, 22980 | |
Snord38a | 4 | 58 | - | snoRNA gene | small nucleolar RNA, C/D box 38A | |
Gm26330 | 4 | 103 | - | snoRNA gene | predicted gene, 26330 | |
Cpgi14653 | 4 | 971 | CpG island | CpG island 14653 | ||
Snord55 | 4 | 77 | - | snoRNA gene | small nucleolar RNA, C/D box 55 | |
Tssr42956 | 4 | 4 | - | TSS region | transcription start site region 42956 | |
Tssr42957 | 4 | 10 | - | TSS region | transcription start site region 42957 | |
Tssr42958 | 4 | 21 | - | TSS region | transcription start site region 42958 | |
Tssr42959 | 4 | 30 | - | TSS region | transcription start site region 42959 | |
Tssr42960 | 4 | 12 | - | TSS region | transcription start site region 42960 | |
Tssr42961 | 4 | 28 | - | TSS region | transcription start site region 42961 | |
Gm22398 | 4 | 124 | - | miRNA gene | predicted gene, 22398 | |
Kif2c | 4 | 22991 | - | protein coding gene | kinesin family member 2C | |
Tssr42962 | 4 | 5 | - | TSS region | transcription start site region 42962 | |
Tssr42963 | 4 | 28 | - | TSS region | transcription start site region 42963 | |
Tssr42964 | 4 | 21 | - | TSS region | transcription start site region 42964 | |
Cpgi14654 | 4 | 767 | CpG island | CpG island 14654 | ||
Tssr42965 | 4 | 66 | - | TSS region | transcription start site region 42965 | |
Tssr42966 | 4 | 13 | - | TSS region | transcription start site region 42966 | |
Tssr42967 | 4 | 2 | - | TSS region | transcription start site region 42967 | |
Gm25099 | 4 | 115 | + | snRNA gene | predicted gene, 25099 | |
Tssr42968 | 4 | 19 | - | TSS region | transcription start site region 42968 | |
Gm23143 | 4 | 115 | + | snRNA gene | predicted gene, 23143 | |
Gt(pU21)107Imeg | 4 | 375 | unclassified gene | gene trap 107, Institute of Molecular Embryology and Genetics | ||
Tssr38608 | 4 | 7 | + | TSS region | transcription start site region 38608 | |
Gm23287 | 4 | 115 | + | snRNA gene | predicted gene, 23287 | |
Armh1 | 4 | 38647 | - | protein coding gene | armadillo-like helical domain containing 1 | |
1700012C08Rik | 4 | 448 | - | unclassified non-coding RNA gene | RIKEN cDNA 1700012C08 gene | |
Fecq2 | 4 | 235 | QTL | fecundity QTL 2 | ||
D4Mit37 | 4 | 235 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 37 | ||
Iva1 | 4 | 3651232 | QTL | isovaleric acid smelling 1 | ||
Skts7 | 4 | 235 | QTL | skin tumor susceptibility 7 | ||
Mvwf3 | 4 | -103204552 | QTL | modifier of von Willebrand factor 3 | ||
Cpgi14655 | 4 | 169 | CpG island | CpG island 14655 | ||
Cpgi14656 | 4 | 653 | CpG island | CpG island 14656 | ||
Tssr42969 | 4 | 34 | - | TSS region | transcription start site region 42969 | |
Tssr42970 | 4 | 21 | - | TSS region | transcription start site region 42970 | |
Tssr42971 | 4 | 35 | - | TSS region | transcription start site region 42971 | |
Tssr42972 | 4 | 12 | - | TSS region | transcription start site region 42972 | |
Tmem53 | 4 | 16631 | + | protein coding gene | transmembrane protein 53 | |
Tssr38609 | 4 | 27 | + | TSS region | transcription start site region 38609 | |
Tssr38610 | 4 | 47 | + | TSS region | transcription start site region 38610 | |
Tssr42973 | 4 | 23 | - | TSS region | transcription start site region 42973 | |
Cpgi14657 | 4 | 326 | CpG island | CpG island 14657 | ||
Rnf220 | 4 | 225589 | - | protein coding gene | ring finger protein 220 | |
Tssr1275 | 4 | 12 | + | TSS region | transcription start site region 1275 | |
Tssr42974 | 4 | 12 | - | TSS region | transcription start site region 42974 | |
Tssr42975 | 4 | 13 | - | TSS region | transcription start site region 42975 | |
Tssr42976 | 4 | 7 | - | TSS region | transcription start site region 42976 | |
Tssr42977 | 4 | 11 | - | TSS region | transcription start site region 42977 | |
Tssr42978 | 4 | 47 | - | TSS region | transcription start site region 42978 | |
Cpgi14658 | 4 | 1163 | CpG island | CpG island 14658 | ||
Tssr42979 | 4 | 20 | - | TSS region | transcription start site region 42979 | |
Gm12843 | 4 | 1908 | + | antisense lncRNA gene | predicted gene 12843 | |
Cpgi14659 | 4 | 1192 | CpG island | CpG island 14659 | ||
Gm40231 | 4 | 7686 | - | lncRNA gene | predicted gene, 40231 | |
Cpgi14660 | 4 | 506 | CpG island | CpG island 14660 | ||
Cpgi14661 | 4 | 244 | CpG island | CpG island 14661 | ||
Cfq1 | 4 | 2930109 | QTL | conditioned fear QTL 1 | ||
C030012D19Rik | 4 | 931 | unclassified gene | RIKEN cDNA C030012D19 gene | ||
Tssr38611 | 4 | 10 | + | TSS region | transcription start site region 38611 | |
Tssr42980 | 4 | 14 | - | TSS region | transcription start site region 42980 | |
Tssr42981 | 4 | 14 | - | TSS region | transcription start site region 42981 | |
Tssr42982 | 4 | 6 | - | TSS region | transcription start site region 42982 | |
Gm12828 | 4 | 4771 | + | antisense lncRNA gene | predicted gene 12828 | |
Tssr38612 | 4 | 16 | + | TSS region | transcription start site region 38612 | |
Tssr38613 | 4 | 12 | + | TSS region | transcription start site region 38613 | |
Tssr1276 | 4 | 8 | + | TSS region | transcription start site region 1276 | |
Tssr38614 | 4 | 4 | + | TSS region | transcription start site region 38614 | |
D4Mit122 | 4 | 101 | DNA segment | DNA segment, Chr 4, Massachusetts Institute of Technology 122 | ||
Tssr42983 | 4 | 12 | - | TSS region | transcription start site region 42983 | |
D4Jpk1 | 4 | 119 | DNA segment | DNA segment, Chr 4, Japan, Kominami 1 | ||
Cpgi14662 | 4 | 1311 | CpG island | CpG island 14662 | ||
Tssr42984 | 4 | 19 | - | TSS region | transcription start site region 42984 | |
Cpgi14663 | 4 | 3206 | CpG island | CpG island 14663 | ||
Tssr42985 | 4 | 19 | - | TSS region | transcription start site region 42985 | |
Tssr42986 | 4 | 4 | - | TSS region | transcription start site region 42986 | |
Tssr38615 | 4 | 43 | + | TSS region | transcription start site region 38615 | |
Gm12827 | 4 | 4150 | + | lincRNA gene | predicted gene 12827 | |
Tssr42987 | 4 | 9 | - | TSS region | transcription start site region 42987 | |
Tssr42988 | 4 | 17 | - | TSS region | transcription start site region 42988 | |
Tssr42989 | 4 | 1 | - | TSS region | transcription start site region 42989 | |
Cpgi14664 | 4 | 254 | CpG island | CpG island 14664 | ||
Gm34669 | 4 | 10238 | + | lncRNA gene | predicted gene, 34669 | |
Gm12826 | 4 | 378 | - | pseudogene | predicted gene 12826 | |
D4Jcs23 | 4 | 277 | DNA segment | DNA segment, Chr 4, John C. Schimenti 23 | ||
Cpgi14665 | 4 | 783 | CpG island | CpG island 14665 | ||
Tssr38616 | 4 | 11 | + | TSS region | transcription start site region 38616 | |
Tssr38617 | 4 | 83 | + | TSS region | transcription start site region 38617 | |
Eri3 | 4 | 123932 | + | protein coding gene | exoribonuclease 3 | |
Tssr38618 | 4 | 34 | + | TSS region | transcription start site region 38618 | |
Tssr38619 | 4 | 15 | + | TSS region | transcription start site region 38619 | |
Tssr38620 | 4 | 4 | + | TSS region | transcription start site region 38620 | |
Tssr38621 | 4 | 4 | + | TSS region | transcription start site region 38621 | |
Tssr38622 | 4 | 39 | + | TSS region | transcription start site region 38622 | |
Tssr38623 | 4 | 18 | + | TSS region | transcription start site region 38623 | |
Gm25559 | 4 | 73 | + | miRNA gene | predicted gene, 25559 | |
Tssr38624 | 4 | 11 | + | TSS region | transcription start site region 38624 | |
Gm19192 | 4 | 557 | + | pseudogene | predicted gene, 19192 | |
Tssr38625 | 4 | 13 | + | TSS region | transcription start site region 38625 | |
Tssr38626 | 4 | 5 | + | TSS region | transcription start site region 38626 | |
Cpgi14666 | 4 | 198 | CpG island | CpG island 14666 | ||
Tssr1277 | 4 | 3 | + | TSS region | transcription start site region 1277 | |
D4Ertd361e | 4 | 237 | DNA segment | DNA segment, Chr 4, ERATO Doi 361, expressed | ||
Tssr38627 | 4 | 31 | + | TSS region | transcription start site region 38627 | |
Dmap1 | 4 | 7592 | - | protein coding gene | DNA methyltransferase 1-associated protein 1 | |
Cpgi14667 | 4 | 944 | CpG island | CpG island 14667 | ||
Tssr42990 | 4 | 9 | - | TSS region | transcription start site region 42990 | |
Tssr42991 | 4 | 46 | - | TSS region | transcription start site region 42991 | |
Gm34746 | 4 | 4954 | + | lncRNA gene | predicted gene, 34746 | |
Gm12840 | 4 | 735 | + | lincRNA gene | predicted gene 12840 | |
Gm12845 | 4 | 1397 | + | protein coding gene | predicted gene 12845 | |
Gm12844 | 4 | 581 | - | pseudogene | predicted gene 12844 | |
Klf17 | 4 | 7812 | - | protein coding gene | Kruppel-like factor 17 | |
Tssr42992 | 4 | 20 | - | TSS region | transcription start site region 42992 | |
Gm40232 | 4 | 5439 | - | lncRNA gene | predicted gene, 40232 | |
Tssr38628 | 4 | 11 | + | TSS region | transcription start site region 38628 | |
Tssr38629 | 4 | 16 | + | TSS region | transcription start site region 38629 | |
Tssr38630 | 4 | 11 | + | TSS region | transcription start site region 38630 | |
Gm12842 | 4 | 475 | - | pseudogene | predicted gene 12842 | |
Tssr42993 | 4 | 5 | - | TSS region | transcription start site region 42993 | |
Tssr38631 | 4 | 40 | + | TSS region | transcription start site region 38631 | |
Slc6a9 | 4 | 34047 | + | protein coding gene | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | |
Cpgi14668 | 4 | 1497 | CpG island | CpG island 14668 | ||
Tssr38632 | 4 | 23 | + | TSS region | transcription start site region 38632 | |
Gm17114 | 4 | 33259 | - | lncRNA gene | predicted gene 17114 | |
Tssr38633 | 4 | 29 | + | TSS region | transcription start site region 38633 | |
Tssr38634 | 4 | 11 | + | TSS region | transcription start site region 38634 | |
Tssr38635 | 4 | 41 | + | TSS region | transcription start site region 38635 | |
Tssr42994 | 4 | 2 | - | TSS region | transcription start site region 42994 | |
Tssr38636 | 4 | 7 | + | TSS region | transcription start site region 38636 | |
Tssr38637 | 4 | 25 | + | TSS region | transcription start site region 38637 | |
Tssr38638 | 4 | 15 | + | TSS region | transcription start site region 38638 | |
Tssr38639 | 4 | 14 | + | TSS region | transcription start site region 38639 | |
Cpgi14669 | 4 | 399 | CpG island | CpG island 14669 | ||
Ccdc24 | 4 | 3401 | - | protein coding gene | coiled-coil domain containing 24 | |
Tssr42995 | 4 | 17 | - | TSS region | transcription start site region 42995 | |
Tssr42996 | 4 | 11 | - | TSS region | transcription start site region 42996 | |
Tssr42997 | 4 | 12 | - | TSS region | transcription start site region 42997 | |
Tssr42998 | 4 | 12 | - | TSS region | transcription start site region 42998 | |
Tssr42999 | 4 | 30 | - | TSS region | transcription start site region 42999 | |
Tssr43000 | 4 | 18 | - | TSS region | transcription start site region 43000 | |
Tssr43001 | 4 | 48 | - | TSS region | transcription start site region 43001 | |
B4galt2 | 4 | 10482 | - | protein coding gene | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 | |
Gm40233 | 4 | 4808 | + | lncRNA gene | predicted gene, 40233 | |
Cpgi14670 | 4 | 1147 | CpG island | CpG island 14670 | ||
Tssr43002 | 4 | 79 | - | TSS region | transcription start site region 43002 | |
Tssr38640 | 4 | 37 | + | TSS region | transcription start site region 38640 | |
Tssr38641 | 4 | 13 | + | TSS region | transcription start site region 38641 | |
Gm12841 | 4 | 2374 | + | antisense lncRNA gene | predicted gene 12841 | |
Atp6v0b | 4 | 2999 | - | protein coding gene | ATPase, H+ transporting, lysosomal V0 subunit B | |
Tssr43003 | 4 | 31 | - | TSS region | transcription start site region 43003 | |
Cpgi14671 | 4 | 1002 | CpG island | CpG island 14671 | ||
Tssr43004 | 4 | 7 | - | TSS region | transcription start site region 43004 | |
Tssr43005 | 4 | 11 | - | TSS region | transcription start site region 43005 | |
Tssr43006 | 4 | 11 | - | TSS region | transcription start site region 43006 | |
Tssr43007 | 4 | 61 | - | TSS region | transcription start site region 43007 | |
Dph2 | 4 | 3360 | - | protein coding gene | DPH2 homolog |