Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:117056075-117156101

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif2b3 4 117019399 to 117086852 67453 + protein coding gene eukaryotic translation initiation factor 2B, subunit 3
Tssr38592 4 117068093 to 117068118 25 + TSS region transcription start site region 38592
Cpgi14648 4 117095741 to 117096430 689 CpG island CpG island 14648
Tssr38593 4 117096031 to 117096042 11 + TSS region transcription start site region 38593
Tssr38594 4 117096049 to 117096083 34 + TSS region transcription start site region 38594
Ptch2 4 117096075 to 117116101 20026 + protein coding gene patched 2
Tssr38595 4 117096796 to 117096807 11 + TSS region transcription start site region 38595
Tssr38596 4 117113023 to 117113026 3 + TSS region transcription start site region 38596
Btbd19 4 117119219 to 117125725 6506 - protein coding gene BTB (POZ) domain containing 19
Cpgi14649 4 117120291 to 117121426 1135 CpG island CpG island 14649
Tssr42943 4 117120297 to 117120306 9 - TSS region transcription start site region 42943
Tssr42944 4 117120331 to 117120342 11 - TSS region transcription start site region 42944
Tssr42945 4 117120454 to 117120469 15 - TSS region transcription start site region 42945
Tssr38597 4 117120592 to 117120606 14 + TSS region transcription start site region 38597
Tssr38598 4 117120720 to 117120739 19 + TSS region transcription start site region 38598
Tssr38599 4 117120740 to 117120751 11 + TSS region transcription start site region 38599
Tssr42946 4 117121241 to 117121248 7 - TSS region transcription start site region 42946
Tssr42947 4 117121255 to 117121285 30 - TSS region transcription start site region 42947
Tssr42948 4 117121286 to 117121318 32 - TSS region transcription start site region 42948
Tssr42949 4 117122315 to 117122353 38 - TSS region transcription start site region 42949
Tssr38600 4 117124527 to 117124551 24 + TSS region transcription start site region 38600
Tssr38601 4 117124660 to 117124677 17 + TSS region transcription start site region 38601
Tssr38602 4 117124933 to 117124981 48 + TSS region transcription start site region 38602
Tssr42950 4 117125636 to 117125683 47 - TSS region transcription start site region 42950
Tssr42951 4 117126054 to 117126074 20 - TSS region transcription start site region 42951
Tssr38603 4 117126767 to 117126774 7 + TSS region transcription start site region 38603
Tssr38604 4 117126776 to 117126797 21 + TSS region transcription start site region 38604
Tctex1d4 4 117126794 to 117128738 1944 + protein coding gene Tctex1 domain containing 4
Tssr38605 4 117126800 to 117126818 18 + TSS region transcription start site region 38605
Plk3 4 117128655 to 117133963 5308 - protein coding gene polo like kinase 3
Tssr42952 4 117131437 to 117131468 31 - TSS region transcription start site region 42952
Tssr42953 4 117131494 to 117131498 4 - TSS region transcription start site region 42953
Cpgi14650 4 117133179 to 117134218 1039 CpG island CpG island 14650
Tssr42954 4 117133953 to 117133969 16 - TSS region transcription start site region 42954
Tssr1274 4 117134134 to 117134158 24 + TSS region transcription start site region 1274
Best4-ps 4 117145257 to 117148285 3028 + pseudogene bestrophin 4, pseudogene
Cpgi14651 4 117146116 to 117146326 210 CpG island CpG island 14651
Tssr42955 4 117148223 to 117148231 8 - TSS region transcription start site region 42955
Cpgi14652 4 117148840 to 117149182 342 CpG island CpG island 14652
Tssr38606 4 117148912 to 117148914 2 + TSS region transcription start site region 38606
Gm13015 4 117148923 to 117149126 203 + pseudogene predicted gene 13015
Tssr38607 4 117153826 to 117153838 12 + TSS region transcription start site region 38607
Rps8 4 117153836 to 117156132 2296 - protein coding gene ribosomal protein S8
Gm22980 4 117154093 to 117154162 69 - snoRNA gene predicted gene, 22980
Snord38a 4 117154516 to 117154574 58 - snoRNA gene small nucleolar RNA, C/D box 38A
Gm26330 4 117155186 to 117155289 103 - snoRNA gene predicted gene, 26330
Cpgi14653 4 117155357 to 117156328 971 CpG island CpG island 14653
Snord55 4 117155771 to 117155848 77 - snoRNA gene small nucleolar RNA, C/D box 55
Tssr42956 4 117155844 to 117155848 4 - TSS region transcription start site region 42956
Tssr42957 4 117156075 to 117156085 10 - TSS region transcription start site region 42957