Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:116700909-116824248

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr38571 4 116701823 to 116701836 13 + TSS region transcription start site region 38571
Mmachc 4 116702434 to 116708385 5951 - protein coding gene methylmalonic aciduria cblC type, with homocystinuria
Tssr38572 4 116708122 to 116708133 11 + TSS region transcription start site region 38572
4930565M07Rik 4 116708124 to 116708431 307 unclassified gene RIKEN cDNA 4930565M07 gene
Cpgi14639 4 116708145 to 116708776 631 CpG island CpG island 14639
Tssr42924 4 116708262 to 116708269 7 - TSS region transcription start site region 42924
Tssr42925 4 116708312 to 116708356 44 - TSS region transcription start site region 42925
Tssr38573 4 116708467 to 116708472 5 + TSS region transcription start site region 38573
Tssr42926 4 116708540 to 116708555 15 - TSS region transcription start site region 42926
Tssr38574 4 116708575 to 116708584 9 + TSS region transcription start site region 38574
Ccdc163 4 116708583 to 116715104 6521 + protein coding gene coiled-coil domain containing 163
Tssr38575 4 116708587 to 116708604 17 + TSS region transcription start site region 38575
Tssr38576 4 116708624 to 116708635 11 + TSS region transcription start site region 38576
Tssr38577 4 116708687 to 116708696 9 + TSS region transcription start site region 38577
Tssr38578 4 116708701 to 116708712 11 + TSS region transcription start site region 38578
Tssr38579 4 116709234 to 116709239 5 + TSS region transcription start site region 38579
Tssr38580 4 116711901 to 116711905 4 + TSS region transcription start site region 38580
Cpgi14640 4 116720794 to 116721440 646 CpG island CpG island 14640
Tesk2 4 116720907 to 116804248 83341 + protein coding gene testis-specific kinase 2
Tssr38581 4 116720920 to 116721004 84 + TSS region transcription start site region 38581
Tssr38582 4 116721067 to 116721078 11 + TSS region transcription start site region 38582
Gm27688 4 116725899 to 116725989 90 + unclassified non-coding RNA gene predicted gene, 27688
D4Dcr17 4 116796039 to 116796142 103 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 17
Toe1 4 116804003 to 116807635 3632 - protein coding gene target of EGR1, member 1 (nuclear)
Cpgi14641 4 116807159 to 116808046 887 CpG island CpG island 14641
Tssr42927 4 116807532 to 116807573 41 - TSS region transcription start site region 42927
Tssr42928 4 116807574 to 116807617 43 - TSS region transcription start site region 42928
Tssr38583 4 116807714 to 116807726 12 + TSS region transcription start site region 38583
Mutyh 4 116807723 to 116819440 11717 + protein coding gene mutY DNA glycosylase
Tssr38584 4 116807728 to 116807751 23 + TSS region transcription start site region 38584
Hpdl 4 116819907 to 116821508 1601 - protein coding gene 4-hydroxyphenylpyruvate dioxygenase-like
Cpgi14642 4 116820552 to 116821655 1103 CpG island CpG island 14642
Tssr42929 4 116820880 to 116820887 7 - TSS region transcription start site region 42929
Tssr42930 4 116820905 to 116820906 1 - TSS region transcription start site region 42930
Tssr42931 4 116821472 to 116821487 15 - TSS region transcription start site region 42931
Tssr42932 4 116821488 to 116821499 11 - TSS region transcription start site region 42932
Tssr42933 4 116821501 to 116821521 20 - TSS region transcription start site region 42933